Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkaO54804 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkaO54804 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkaO54804 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkaO54804 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkaO54804 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ChkaO54804 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
ChkaO54804 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkaO54804 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.67■□□□□ 0.9
ChkaO54804 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkaO54804 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkaO54804 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.66■□□□□ 0.9
ChkaO54804 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ChkaO54804 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkaO54804 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkaO54804 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkaO54804 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ChkaO54804 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.66■□□□□ 0.9
ChkaO54804 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkaO54804 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkaO54804 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ChkaO54804 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ChkaO54804 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ChkaO54804 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.65■□□□□ 0.9
ChkaO54804 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ChkaO54804 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.65■□□□□ 0.9
ChkaO54804 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkaO54804 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ChkaO54804 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ChkaO54804 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChkaO54804 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChkaO54804 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ChkaO54804 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.63■□□□□ 0.89
ChkaO54804 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ChkaO54804 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChkaO54804 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChkaO54804 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ChkaO54804 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.62■□□□□ 0.89
ChkaO54804 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.62■□□□□ 0.89
ChkaO54804 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ChkaO54804 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ChkaO54804 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ChkaO54804 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ChkaO54804 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ChkaO54804 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChkaO54804 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChkaO54804 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.6■□□□□ 0.89
ChkaO54804 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.6■□□□□ 0.89
ChkaO54804 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChkaO54804 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChkaO54804 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ChkaO54804 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ChkaO54804 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.59■□□□□ 0.89
ChkaO54804 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.59■□□□□ 0.89
ChkaO54804 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChkaO54804 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.59■□□□□ 0.89
ChkaO54804 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ChkaO54804 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.58■□□□□ 0.89
ChkaO54804 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.58■□□□□ 0.89
ChkaO54804 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ChkaO54804 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ChkaO54804 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ChkaO54804 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ChkaO54804 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ChkaO54804 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ChkaO54804 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
ChkaO54804 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ChkaO54804 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.57■□□□□ 0.88
ChkaO54804 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ChkaO54804 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms