Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Gm10420-201ENSMUST00000121713 882 ntBASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-23A0A0A6YVW3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-23A0A0A6YVW3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms