Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-3A0A075B6B3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6d-3A0A075B6B3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-3A0A075B6B3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav6d-3A0A075B6B3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-3A0A075B6B3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-3A0A075B6B3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-3A0A075B6B3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-3A0A075B6B3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-3A0A075B6B3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-3A0A075B6B3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.37■□□□□ 0.21
Trav6d-3A0A075B6B3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Cap2-205ENSMUST00000225824 1634 ntBASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-3A0A075B6B3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms