Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Llcfc1Q9D9P8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Llcfc1Q9D9P8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Llcfc1Q9D9P8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Llcfc1Q9D9P8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Llcfc1Q9D9P8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Llcfc1Q9D9P8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Llcfc1Q9D9P8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Llcfc1Q9D9P8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Llcfc1Q9D9P8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Llcfc1Q9D9P8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Llcfc1Q9D9P8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Llcfc1Q9D9P8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Llcfc1Q9D9P8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Llcfc1Q9D9P8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Llcfc1Q9D9P8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Llcfc1Q9D9P8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Llcfc1Q9D9P8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Llcfc1Q9D9P8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Llcfc1Q9D9P8 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.62■■□□□ 1.05
Llcfc1Q9D9P8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Llcfc1Q9D9P8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Llcfc1Q9D9P8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Llcfc1Q9D9P8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Llcfc1Q9D9P8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Llcfc1Q9D9P8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.6■■□□□ 1.05
Llcfc1Q9D9P8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms