Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40cQ8VHQ4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40cQ8VHQ4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40cQ8VHQ4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40cQ8VHQ4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40cQ8VHQ4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40cQ8VHQ4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Iqck-206ENSMUST00000208658 2891 ntBASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40cQ8VHQ4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rab40cQ8VHQ4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.67■□□□□ 0.26
Rab40cQ8VHQ4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.66■□□□□ 0.26
Rab40cQ8VHQ4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms