Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Rab40cQ8VHQ4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab40cQ8VHQ4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rab40cQ8VHQ4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Gm6311-201ENSMUST00000073790 878 ntBASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rab40cQ8VHQ4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rab40cQ8VHQ4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40cQ8VHQ4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40cQ8VHQ4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40cQ8VHQ4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40cQ8VHQ4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40cQ8VHQ4 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.77■□□□□ 0.28
Rab40cQ8VHQ4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.77■□□□□ 0.27
Rab40cQ8VHQ4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40cQ8VHQ4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rab40cQ8VHQ4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40cQ8VHQ4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40cQ8VHQ4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40cQ8VHQ4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40cQ8VHQ4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms