Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr3Q8BL00 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr3Q8BL00 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr3Q8BL00 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr3Q8BL00 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.02■□□□□ 0.48
Cdhr3Q8BL00 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr3Q8BL00 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr3Q8BL00 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr3Q8BL00 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr3Q8BL00 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdhr3Q8BL00 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdhr3Q8BL00 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdhr3Q8BL00 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdhr3Q8BL00 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdhr3Q8BL00 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdhr3Q8BL00 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdhr3Q8BL00 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Gm12366-201ENSMUST00000121722 873 ntBASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Gm5786-201ENSMUST00000085368 882 ntBASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdhr3Q8BL00 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Gm10420-201ENSMUST00000121713 882 ntBASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdhr3Q8BL00 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
Cdhr3Q8BL00 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Cdhr3Q8BL00 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Cdhr3Q8BL00 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdhr3Q8BL00 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdhr3Q8BL00 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms