Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herpud1Q9JJK5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Herpud1Q9JJK5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Herpud1Q9JJK5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Herpud1Q9JJK5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Herpud1Q9JJK5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Herpud1Q9JJK5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.23■□□□□ 0.35
Herpud1Q9JJK5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.22■□□□□ 0.35
Herpud1Q9JJK5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Herpud1Q9JJK5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Herpud1Q9JJK5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Herpud1Q9JJK5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Herpud1Q9JJK5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Herpud1Q9JJK5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Herpud1Q9JJK5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Herpud1Q9JJK5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herpud1Q9JJK5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Herpud1Q9JJK5 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.18■□□□□ 0.34
Herpud1Q9JJK5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Herpud1Q9JJK5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Herpud1Q9JJK5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Herpud1Q9JJK5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Herpud1Q9JJK5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Herpud1Q9JJK5 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.16■□□□□ 0.34
Herpud1Q9JJK5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Herpud1Q9JJK5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Herpud1Q9JJK5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Herpud1Q9JJK5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herpud1Q9JJK5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Herpud1Q9JJK5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herpud1Q9JJK5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herpud1Q9JJK5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herpud1Q9JJK5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herpud1Q9JJK5 Iqck-206ENSMUST00000208658 2891 ntBASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms