Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim33Q99PP7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.52■□□□□ 0.88
Trim33Q99PP7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim33Q99PP7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.52■□□□□ 0.88
Trim33Q99PP7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim33Q99PP7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.52■□□□□ 0.88
Trim33Q99PP7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim33Q99PP7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.51■□□□□ 0.87
Trim33Q99PP7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Trim33Q99PP7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim33Q99PP7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim33Q99PP7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim33Q99PP7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trim33Q99PP7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim33Q99PP7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim33Q99PP7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim33Q99PP7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim33Q99PP7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim33Q99PP7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim33Q99PP7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim33Q99PP7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim33Q99PP7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.49■□□□□ 0.87
Trim33Q99PP7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim33Q99PP7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim33Q99PP7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim33Q99PP7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim33Q99PP7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim33Q99PP7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim33Q99PP7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim33Q99PP7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.47■□□□□ 0.87
Trim33Q99PP7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim33Q99PP7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim33Q99PP7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim33Q99PP7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.46■□□□□ 0.87
Trim33Q99PP7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim33Q99PP7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim33Q99PP7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Trim33Q99PP7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim33Q99PP7 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.45■□□□□ 0.86
Trim33Q99PP7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim33Q99PP7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim33Q99PP7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim33Q99PP7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim33Q99PP7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim33Q99PP7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim33Q99PP7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim33Q99PP7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim33Q99PP7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.44■□□□□ 0.86
Trim33Q99PP7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim33Q99PP7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim33Q99PP7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Trim33Q99PP7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim33Q99PP7 Gm10399-202ENSMUST00000202768 748 ntBASIC20.42■□□□□ 0.86
Trim33Q99PP7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.42■□□□□ 0.86
Trim33Q99PP7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim33Q99PP7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim33Q99PP7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim33Q99PP7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim33Q99PP7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim33Q99PP7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim33Q99PP7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim33Q99PP7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trim33Q99PP7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trim33Q99PP7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim33Q99PP7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim33Q99PP7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim33Q99PP7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim33Q99PP7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim33Q99PP7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms