Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc4Q3TR08 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fndc4Q3TR08 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.59■□□□□ 0.41
Fndc4Q3TR08 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.59■□□□□ 0.41
Fndc4Q3TR08 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fndc4Q3TR08 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc4Q3TR08 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Gm10420-201ENSMUST00000121713 882 ntBASIC17.58■□□□□ 0.4
Fndc4Q3TR08 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc4Q3TR08 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc4Q3TR08 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Fndc4Q3TR08 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc4Q3TR08 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc4Q3TR08 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc4Q3TR08 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc4Q3TR08 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc4Q3TR08 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc4Q3TR08 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc4Q3TR08 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fndc4Q3TR08 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Fndc4Q3TR08 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fndc4Q3TR08 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fndc4Q3TR08 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.52■□□□□ 0.4
Fndc4Q3TR08 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fndc4Q3TR08 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fndc4Q3TR08 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.52■□□□□ 0.39
Fndc4Q3TR08 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Fndc4Q3TR08 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fndc4Q3TR08 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fndc4Q3TR08 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fndc4Q3TR08 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Fndc4Q3TR08 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fndc4Q3TR08 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.51■□□□□ 0.39
Fndc4Q3TR08 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fndc4Q3TR08 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.51■□□□□ 0.39
Fndc4Q3TR08 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fndc4Q3TR08 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fndc4Q3TR08 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.5■□□□□ 0.39
Fndc4Q3TR08 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Fndc4Q3TR08 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fndc4Q3TR08 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fndc4Q3TR08 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fndc4Q3TR08 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Fndc4Q3TR08 Golph3-202ENSMUST00000226517 2359 ntBASIC17.49■□□□□ 0.39
Fndc4Q3TR08 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.49■□□□□ 0.39
Fndc4Q3TR08 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 163.3 ms