Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx3-2P97503 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Nkx3-2P97503 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Gm9847-201ENSMUST00000052528 599 ntBASIC19.56■□□□□ 0.72
Nkx3-2P97503 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx3-2P97503 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx3-2P97503 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx3-2P97503 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx3-2P97503 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx3-2P97503 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx3-2P97503 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx3-2P97503 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx3-2P97503 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx3-2P97503 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nkx3-2P97503 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx3-2P97503 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx3-2P97503 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nkx3-2P97503 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx3-2P97503 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx3-2P97503 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx3-2P97503 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx3-2P97503 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx3-2P97503 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nkx3-2P97503 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx3-2P97503 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Nkx3-2P97503 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx3-2P97503 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.47■□□□□ 0.71
Nkx3-2P97503 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.47■□□□□ 0.71
Nkx3-2P97503 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.47■□□□□ 0.71
Nkx3-2P97503 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Nkx3-2P97503 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx3-2P97503 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkx3-2P97503 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Nkx3-2P97503 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 190.6 ms