Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Gm9847-201ENSMUST00000052528 599 ntBASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5-1A0A075B5Z7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Gm13241-201ENSMUST00000094493 780 ntBASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav5-1A0A075B5Z7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.46
Trav5-1A0A075B5Z7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav5-1A0A075B5Z7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav5-1A0A075B5Z7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav5-1A0A075B5Z7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.89■□□□□ 0.45
Trav5-1A0A075B5Z7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
Trav5-1A0A075B5Z7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav5-1A0A075B5Z7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav5-1A0A075B5Z7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5-1A0A075B5Z7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav5-1A0A075B5Z7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav5-1A0A075B5Z7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav5-1A0A075B5Z7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.86■□□□□ 0.45
Trav5-1A0A075B5Z7 Gm9870-201ENSMUST00000063874 645 ntBASIC17.86■□□□□ 0.45
Trav5-1A0A075B5Z7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav5-1A0A075B5Z7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.85■□□□□ 0.45
Trav5-1A0A075B5Z7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.85■□□□□ 0.45
Trav5-1A0A075B5Z7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Trav5-1A0A075B5Z7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav5-1A0A075B5Z7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav5-1A0A075B5Z7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav5-1A0A075B5Z7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav5-1A0A075B5Z7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav5-1A0A075B5Z7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav5-1A0A075B5Z7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav5-1A0A075B5Z7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav5-1A0A075B5Z7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.83■□□□□ 0.44
Trav5-1A0A075B5Z7 Gm7143-201ENSMUST00000222811 859 ntBASIC17.83■□□□□ 0.44
Trav5-1A0A075B5Z7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav5-1A0A075B5Z7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav5-1A0A075B5Z7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav5-1A0A075B5Z7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Trav5-1A0A075B5Z7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms