Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Raf1Q99N57 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.63■□□□□ 0.57
Raf1Q99N57 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Raf1Q99N57 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Raf1Q99N57 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Raf1Q99N57 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Raf1Q99N57 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Raf1Q99N57 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Raf1Q99N57 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Raf1Q99N57 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Raf1Q99N57 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Raf1Q99N57 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Raf1Q99N57 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Raf1Q99N57 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Raf1Q99N57 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Raf1Q99N57 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Raf1Q99N57 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Raf1Q99N57 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Raf1Q99N57 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
Raf1Q99N57 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Raf1Q99N57 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.6■□□□□ 0.57
Raf1Q99N57 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Raf1Q99N57 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.6■□□□□ 0.57
Raf1Q99N57 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Raf1Q99N57 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Raf1Q99N57 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Raf1Q99N57 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Raf1Q99N57 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.59■□□□□ 0.57
Raf1Q99N57 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Raf1Q99N57 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Raf1Q99N57 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Raf1Q99N57 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.58■□□□□ 0.57
Raf1Q99N57 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Raf1Q99N57 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Raf1Q99N57 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Raf1Q99N57 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.58■□□□□ 0.56
Raf1Q99N57 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Raf1Q99N57 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Raf1Q99N57 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Raf1Q99N57 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Raf1Q99N57 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Raf1Q99N57 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.57■□□□□ 0.56
Raf1Q99N57 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Raf1Q99N57 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Raf1Q99N57 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Raf1Q99N57 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Raf1Q99N57 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.57■□□□□ 0.56
Raf1Q99N57 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.57■□□□□ 0.56
Raf1Q99N57 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Raf1Q99N57 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Raf1Q99N57 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.56■□□□□ 0.56
Raf1Q99N57 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Raf1Q99N57 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raf1Q99N57 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raf1Q99N57 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raf1Q99N57 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raf1Q99N57 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raf1Q99N57 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Raf1Q99N57 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Raf1Q99N57 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Raf1Q99N57 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Raf1Q99N57 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raf1Q99N57 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.55■□□□□ 0.56
Raf1Q99N57 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Raf1Q99N57 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Raf1Q99N57 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raf1Q99N57 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Raf1Q99N57 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raf1Q99N57 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raf1Q99N57 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Raf1Q99N57 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Raf1Q99N57 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raf1Q99N57 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raf1Q99N57 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Raf1Q99N57 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Raf1Q99N57 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raf1Q99N57 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.53■□□□□ 0.56
Raf1Q99N57 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.53■□□□□ 0.56
Raf1Q99N57 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raf1Q99N57 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raf1Q99N57 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Raf1Q99N57 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Raf1Q99N57 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Raf1Q99N57 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Raf1Q99N57 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Raf1Q99N57 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms