Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Trnt1Q8K1J6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.27■□□□□ 0.83
Trnt1Q8K1J6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trnt1Q8K1J6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnt1Q8K1J6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnt1Q8K1J6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trnt1Q8K1J6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnt1Q8K1J6 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.26■□□□□ 0.83
Trnt1Q8K1J6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnt1Q8K1J6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnt1Q8K1J6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnt1Q8K1J6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trnt1Q8K1J6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trnt1Q8K1J6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnt1Q8K1J6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Trnt1Q8K1J6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnt1Q8K1J6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trnt1Q8K1J6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trnt1Q8K1J6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnt1Q8K1J6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnt1Q8K1J6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trnt1Q8K1J6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnt1Q8K1J6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnt1Q8K1J6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnt1Q8K1J6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnt1Q8K1J6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnt1Q8K1J6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnt1Q8K1J6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnt1Q8K1J6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnt1Q8K1J6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnt1Q8K1J6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trnt1Q8K1J6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnt1Q8K1J6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trnt1Q8K1J6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnt1Q8K1J6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.16■□□□□ 0.82
Trnt1Q8K1J6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnt1Q8K1J6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.15■□□□□ 0.82
Trnt1Q8K1J6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms