Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
SgcaP82350 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SgcaP82350 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcaP82350 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcaP82350 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SgcaP82350 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SgcaP82350 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcaP82350 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.38■□□□□ 0.37
SgcaP82350 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
SgcaP82350 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SgcaP82350 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SgcaP82350 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.37■□□□□ 0.37
SgcaP82350 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcaP82350 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcaP82350 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcaP82350 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcaP82350 Gm45364-201ENSMUST00000210883 159 ntBASIC17.36■□□□□ 0.37
SgcaP82350 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.36■□□□□ 0.37
SgcaP82350 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SgcaP82350 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcaP82350 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcaP82350 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SgcaP82350 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcaP82350 Gm8503-201ENSMUST00000118131 455 ntBASIC17.34■□□□□ 0.37
SgcaP82350 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SgcaP82350 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcaP82350 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcaP82350 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcaP82350 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcaP82350 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcaP82350 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SgcaP82350 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcaP82350 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcaP82350 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SgcaP82350 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SgcaP82350 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SgcaP82350 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcaP82350 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SgcaP82350 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.33■□□□□ 0.36
SgcaP82350 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcaP82350 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcaP82350 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.32■□□□□ 0.36
SgcaP82350 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SgcaP82350 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.32■□□□□ 0.36
SgcaP82350 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.32■□□□□ 0.36
SgcaP82350 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.32■□□□□ 0.36
SgcaP82350 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgcaP82350 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SgcaP82350 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcaP82350 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SgcaP82350 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SgcaP82350 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcaP82350 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.3■□□□□ 0.36
SgcaP82350 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcaP82350 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SgcaP82350 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgcaP82350 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SgcaP82350 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.29■□□□□ 0.36
SgcaP82350 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgcaP82350 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms