Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Lsm3P62311 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm3P62311 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm3P62311 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm3P62311 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm3P62311 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lsm3P62311 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm3P62311 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lsm3P62311 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lsm3P62311 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lsm3P62311 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lsm3P62311 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm3P62311 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19■□□□□ 0.63
Lsm3P62311 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Lsm3P62311 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm3P62311 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19■□□□□ 0.63
Lsm3P62311 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lsm3P62311 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm3P62311 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm3P62311 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm3P62311 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm3P62311 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm3P62311 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.99■□□□□ 0.63
Lsm3P62311 Nkain2-201ENSMUST00000092602 558 ntBASIC18.99■□□□□ 0.63
Lsm3P62311 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lsm3P62311 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm3P62311 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm3P62311 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lsm3P62311 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lsm3P62311 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.98■□□□□ 0.63
Lsm3P62311 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm3P62311 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm3P62311 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lsm3P62311 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Lsm3P62311 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm3P62311 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm3P62311 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm3P62311 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.97■□□□□ 0.63
Lsm3P62311 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm3P62311 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Lsm3P62311 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm3P62311 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm3P62311 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Lsm3P62311 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lsm3P62311 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lsm3P62311 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.95■□□□□ 0.62
Lsm3P62311 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lsm3P62311 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm3P62311 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.94■□□□□ 0.62
Lsm3P62311 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm3P62311 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm3P62311 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm3P62311 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm3P62311 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lsm3P62311 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm3P62311 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lsm3P62311 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm3P62311 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lsm3P62311 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm3P62311 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Lsm3P62311 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm3P62311 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm3P62311 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.93■□□□□ 0.62
Lsm3P62311 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.93■□□□□ 0.62
Lsm3P62311 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm3P62311 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
Lsm3P62311 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lsm3P62311 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Lsm3P62311 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Lsm3P62311 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm3P62311 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.91■□□□□ 0.62
Lsm3P62311 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lsm3P62311 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.91■□□□□ 0.62
Lsm3P62311 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Lsm3P62311 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.91■□□□□ 0.62
Lsm3P62311 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm3P62311 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm3P62311 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm3P62311 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lsm3P62311 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lsm3P62311 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm3P62311 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lsm3P62311 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms