Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClpxQ9JHS4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClpxQ9JHS4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClpxQ9JHS4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
ClpxQ9JHS4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ClpxQ9JHS4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClpxQ9JHS4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClpxQ9JHS4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ClpxQ9JHS4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ClpxQ9JHS4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClpxQ9JHS4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ClpxQ9JHS4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Gm44428-201ENSMUST00000204474 874 ntBASIC19.07■□□□□ 0.64
ClpxQ9JHS4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClpxQ9JHS4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.07■□□□□ 0.64
ClpxQ9JHS4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
ClpxQ9JHS4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ClpxQ9JHS4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClpxQ9JHS4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ClpxQ9JHS4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClpxQ9JHS4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Gm14523-201ENSMUST00000117260 558 ntBASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.03■□□□□ 0.64
ClpxQ9JHS4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.03■□□□□ 0.64
ClpxQ9JHS4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClpxQ9JHS4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ClpxQ9JHS4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClpxQ9JHS4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClpxQ9JHS4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.02■□□□□ 0.63
ClpxQ9JHS4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClpxQ9JHS4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClpxQ9JHS4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.01■□□□□ 0.63
ClpxQ9JHS4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClpxQ9JHS4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClpxQ9JHS4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClpxQ9JHS4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.01■□□□□ 0.63
ClpxQ9JHS4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClpxQ9JHS4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ClpxQ9JHS4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClpxQ9JHS4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClpxQ9JHS4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClpxQ9JHS4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19■□□□□ 0.63
ClpxQ9JHS4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClpxQ9JHS4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpxQ9JHS4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ClpxQ9JHS4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
ClpxQ9JHS4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpxQ9JHS4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.98■□□□□ 0.63
ClpxQ9JHS4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
ClpxQ9JHS4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpxQ9JHS4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpxQ9JHS4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.97■□□□□ 0.63
ClpxQ9JHS4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.97■□□□□ 0.63
ClpxQ9JHS4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpxQ9JHS4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
ClpxQ9JHS4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpxQ9JHS4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ClpxQ9JHS4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpxQ9JHS4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpxQ9JHS4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpxQ9JHS4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpxQ9JHS4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms