Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim63Q38HM4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim63Q38HM4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim63Q38HM4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim63Q38HM4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim63Q38HM4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim63Q38HM4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim63Q38HM4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim63Q38HM4 Golph3-202ENSMUST00000226517 2359 ntBASIC17.44■□□□□ 0.38
Trim63Q38HM4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim63Q38HM4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim63Q38HM4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim63Q38HM4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim63Q38HM4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trim63Q38HM4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim63Q38HM4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim63Q38HM4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim63Q38HM4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim63Q38HM4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.38■□□□□ 0.37
Trim63Q38HM4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim63Q38HM4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim63Q38HM4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim63Q38HM4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim63Q38HM4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim63Q38HM4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim63Q38HM4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim63Q38HM4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms