Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.51■□□□□ 0.39
SgcaP82350 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SgcaP82350 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SgcaP82350 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.51■□□□□ 0.39
SgcaP82350 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.51■□□□□ 0.39
SgcaP82350 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SgcaP82350 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SgcaP82350 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcaP82350 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcaP82350 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SgcaP82350 Terc-201ENSMUST00000082862 423 ntBASIC17.5■□□□□ 0.39
SgcaP82350 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.5■□□□□ 0.39
SgcaP82350 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcaP82350 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcaP82350 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SgcaP82350 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SgcaP82350 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SgcaP82350 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.49■□□□□ 0.39
SgcaP82350 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.48■□□□□ 0.39
SgcaP82350 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Gm6821-201ENSMUST00000107540 542 ntBASIC17.48■□□□□ 0.39
SgcaP82350 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SgcaP82350 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.47■□□□□ 0.39
SgcaP82350 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SgcaP82350 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SgcaP82350 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SgcaP82350 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SgcaP82350 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SgcaP82350 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SgcaP82350 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SgcaP82350 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SgcaP82350 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SgcaP82350 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.45■□□□□ 0.38
SgcaP82350 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.45■□□□□ 0.38
SgcaP82350 Mir3960-201ENSMUST00000198213 73 ntBASIC17.45■□□□□ 0.38
SgcaP82350 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SgcaP82350 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.45■□□□□ 0.38
SgcaP82350 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SgcaP82350 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SgcaP82350 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SgcaP82350 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SgcaP82350 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SgcaP82350 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
SgcaP82350 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SgcaP82350 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.44■□□□□ 0.38
SgcaP82350 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.44■□□□□ 0.38
SgcaP82350 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcaP82350 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcaP82350 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcaP82350 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SgcaP82350 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.43■□□□□ 0.38
SgcaP82350 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcaP82350 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SgcaP82350 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcaP82350 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SgcaP82350 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SgcaP82350 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SgcaP82350 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SgcaP82350 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcaP82350 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SgcaP82350 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SgcaP82350 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcaP82350 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcaP82350 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms