Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox6P40645 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox6P40645 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox6P40645 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox6P40645 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox6P40645 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox6P40645 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox6P40645 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox6P40645 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox6P40645 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox6P40645 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Sox6P40645 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.58■□□□□ 0.72
Sox6P40645 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox6P40645 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox6P40645 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sox6P40645 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox6P40645 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox6P40645 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox6P40645 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox6P40645 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sox6P40645 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox6P40645 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sox6P40645 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox6P40645 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Sox6P40645 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox6P40645 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Sox6P40645 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Sox6P40645 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox6P40645 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.56■□□□□ 0.72
Sox6P40645 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox6P40645 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox6P40645 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox6P40645 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox6P40645 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox6P40645 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sox6P40645 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sox6P40645 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sox6P40645 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox6P40645 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sox6P40645 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.53■□□□□ 0.72
Sox6P40645 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sox6P40645 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Sox6P40645 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.52■□□□□ 0.72
Sox6P40645 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox6P40645 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox6P40645 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox6P40645 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox6P40645 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox6P40645 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sox6P40645 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox6P40645 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox6P40645 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox6P40645 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox6P40645 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox6P40645 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Sox6P40645 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sox6P40645 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox6P40645 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sox6P40645 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sox6P40645 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox6P40645 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox6P40645 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox6P40645 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox6P40645 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sox6P40645 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox6P40645 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox6P40645 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox6P40645 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sox6P40645 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sox6P40645 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox6P40645 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox6P40645 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.49■□□□□ 0.71
Sox6P40645 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox6P40645 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox6P40645 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox6P40645 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox6P40645 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox6P40645 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox6P40645 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.48■□□□□ 0.71
Sox6P40645 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms