Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc25a53A2AF28 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Slc25a53A2AF28 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc25a53A2AF28 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Slc25a53A2AF28 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc25a53A2AF28 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc25a53A2AF28 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slc25a53A2AF28 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Slc25a53A2AF28 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc25a53A2AF28 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.76■□□□□ 0.59
Slc25a53A2AF28 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc25a53A2AF28 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc25a53A2AF28 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Slc25a53A2AF28 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc25a53A2AF28 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Gm12922-201ENSMUST00000120626 809 ntBASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Gm13241-201ENSMUST00000094493 780 ntBASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Slc25a53A2AF28 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc25a53A2AF28 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Gm9847-201ENSMUST00000052528 599 ntBASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc25a53A2AF28 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc25a53A2AF28 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc25a53A2AF28 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.71■□□□□ 0.59
Slc25a53A2AF28 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc25a53A2AF28 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc25a53A2AF28 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc25a53A2AF28 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc25a53A2AF28 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Slc25a53A2AF28 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc25a53A2AF28 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc25a53A2AF28 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc25a53A2AF28 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc25a53A2AF28 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc25a53A2AF28 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc25a53A2AF28 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc25a53A2AF28 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc25a53A2AF28 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc25a53A2AF28 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc25a53A2AF28 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.69■□□□□ 0.58
Slc25a53A2AF28 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc25a53A2AF28 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc25a53A2AF28 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms