Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.87■□□□□ 0.77
Hmgn3Q9DCB1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn3Q9DCB1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn3Q9DCB1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.87■□□□□ 0.77
Hmgn3Q9DCB1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn3Q9DCB1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn3Q9DCB1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Gm6821-201ENSMUST00000107540 542 ntBASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn3Q9DCB1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn3Q9DCB1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn3Q9DCB1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hmgn3Q9DCB1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.83■□□□□ 0.77
Hmgn3Q9DCB1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Hmgn3Q9DCB1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn3Q9DCB1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn3Q9DCB1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.82■□□□□ 0.76
Hmgn3Q9DCB1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Hmgn3Q9DCB1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn3Q9DCB1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn3Q9DCB1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn3Q9DCB1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn3Q9DCB1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.81■□□□□ 0.76
Hmgn3Q9DCB1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn3Q9DCB1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn3Q9DCB1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn3Q9DCB1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn3Q9DCB1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.78■□□□□ 0.76
Hmgn3Q9DCB1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgn3Q9DCB1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgn3Q9DCB1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgn3Q9DCB1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgn3Q9DCB1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.78■□□□□ 0.76
Hmgn3Q9DCB1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgn3Q9DCB1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hmgn3Q9DCB1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgn3Q9DCB1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgn3Q9DCB1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgn3Q9DCB1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.76■□□□□ 0.75
Hmgn3Q9DCB1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.75■□□□□ 0.75
Hmgn3Q9DCB1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgn3Q9DCB1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hmgn3Q9DCB1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgn3Q9DCB1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.75■□□□□ 0.75
Hmgn3Q9DCB1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms