Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.45■□□□□ 0.7
Cnih3Q6ZWS4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.44■□□□□ 0.7
Cnih3Q6ZWS4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Cnih3Q6ZWS4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnih3Q6ZWS4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cnih3Q6ZWS4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnih3Q6ZWS4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cnih3Q6ZWS4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cnih3Q6ZWS4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cnih3Q6ZWS4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cnih3Q6ZWS4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cnih3Q6ZWS4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cnih3Q6ZWS4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cnih3Q6ZWS4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cnih3Q6ZWS4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnih3Q6ZWS4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Mir3960-201ENSMUST00000198213 73 ntBASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cnih3Q6ZWS4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnih3Q6ZWS4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cnih3Q6ZWS4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Gm45364-201ENSMUST00000210883 159 ntBASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnih3Q6ZWS4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cnih3Q6ZWS4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnih3Q6ZWS4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnih3Q6ZWS4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms