Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa4Q62425 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Mir3960-201ENSMUST00000198213 73 ntBASIC15.3■□□□□ 0.04
Ndufa4Q62425 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ndufa4Q62425 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndufa4Q62425 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa4Q62425 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa4Q62425 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
Ndufa4Q62425 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa4Q62425 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa4Q62425 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.28■□□□□ 0.04
Ndufa4Q62425 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa4Q62425 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufa4Q62425 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.27■□□□□ 0.04
Ndufa4Q62425 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufa4Q62425 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.27■□□□□ 0.03
Ndufa4Q62425 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufa4Q62425 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ndufa4Q62425 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufa4Q62425 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufa4Q62425 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.26■□□□□ 0.03
Ndufa4Q62425 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa4Q62425 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa4Q62425 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa4Q62425 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.23■□□□□ 0.03
Ndufa4Q62425 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa4Q62425 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.22■□□□□ 0.03
Ndufa4Q62425 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Gm6821-201ENSMUST00000107540 542 ntBASIC15.22■□□□□ 0.03
Ndufa4Q62425 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa4Q62425 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms