Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv3-4A0A140T8Q4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Gm37415-201ENSMUST00000192265 2054 ntBASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv3-4A0A140T8Q4 Gm12504-201ENSMUST00000120860 2231 ntBASIC13.21□□□□□ -0.29
Igkv3-4A0A140T8Q4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv3-4A0A140T8Q4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv3-4A0A140T8Q4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv3-4A0A140T8Q4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Igkv3-4A0A140T8Q4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Igkv3-4A0A140T8Q4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Igkv3-4A0A140T8Q4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv3-4A0A140T8Q4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-4A0A140T8Q4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Gm4799-201ENSMUST00000095396 657 ntBASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-4A0A140T8Q4 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Igkv3-4A0A140T8Q4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms