Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav23A0A0G2JG17 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Gm43566-201ENSMUST00000196851 808 ntBASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav23A0A0G2JG17 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav23A0A0G2JG17 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav23A0A0G2JG17 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav23A0A0G2JG17 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav23A0A0G2JG17 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav23A0A0G2JG17 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Trav23A0A0G2JG17 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav23A0A0G2JG17 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav23A0A0G2JG17 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav23A0A0G2JG17 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav23A0A0G2JG17 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Gm5812-201ENSMUST00000061073 957 ntBASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav23A0A0G2JG17 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Gm15820-201ENSMUST00000201566 728 ntBASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav23A0A0G2JG17 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav23A0A0G2JG17 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav23A0A0G2JG17 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav23A0A0G2JG17 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav23A0A0G2JG17 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav23A0A0G2JG17 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav23A0A0G2JG17 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav23A0A0G2JG17 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms