Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-5A0A075B621 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-5A0A075B621 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-5A0A075B621 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-5A0A075B621 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-5A0A075B621 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-5A0A075B621 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-5A0A075B621 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav6n-5A0A075B621 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav6n-5A0A075B621 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-5A0A075B621 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav6n-5A0A075B621 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-5A0A075B621 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-5A0A075B621 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-5A0A075B621 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-5A0A075B621 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6n-5A0A075B621 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-5A0A075B621 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav6n-5A0A075B621 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-5A0A075B621 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-5A0A075B621 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-5A0A075B621 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-5A0A075B621 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-5A0A075B621 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-5A0A075B621 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-5A0A075B621 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-5A0A075B621 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-5A0A075B621 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-5A0A075B621 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav6n-5A0A075B621 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-5A0A075B621 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-5A0A075B621 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms