Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.95■■□□□ 1.74
Zc3h8Q9JJ48 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Zc3h8Q9JJ48 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Zc3h8Q9JJ48 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.93■■□□□ 1.74
Zc3h8Q9JJ48 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Zc3h8Q9JJ48 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.89■■□□□ 1.74
Zc3h8Q9JJ48 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Zc3h8Q9JJ48 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Zc3h8Q9JJ48 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Zc3h8Q9JJ48 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.83■■□□□ 1.73
Zc3h8Q9JJ48 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Zc3h8Q9JJ48 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Zc3h8Q9JJ48 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.77■■□□□ 1.72
Zc3h8Q9JJ48 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Zc3h8Q9JJ48 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Zc3h8Q9JJ48 Gm26115-201ENSMUST00000175605 87 ntBASIC25.67■■□□□ 1.7
Zc3h8Q9JJ48 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Zc3h8Q9JJ48 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Zc3h8Q9JJ48 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Zc3h8Q9JJ48 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Zc3h8Q9JJ48 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Zc3h8Q9JJ48 Gm8109-201ENSMUST00000194076 746 ntBASIC25.57■■□□□ 1.68
Zc3h8Q9JJ48 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.53■■□□□ 1.68
Zc3h8Q9JJ48 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.53■■□□□ 1.68
Zc3h8Q9JJ48 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.52■■□□□ 1.68
Zc3h8Q9JJ48 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Zc3h8Q9JJ48 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Zc3h8Q9JJ48 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zc3h8Q9JJ48 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zc3h8Q9JJ48 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zc3h8Q9JJ48 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zc3h8Q9JJ48 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Zc3h8Q9JJ48 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Zc3h8Q9JJ48 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Zc3h8Q9JJ48 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Zc3h8Q9JJ48 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Zc3h8Q9JJ48 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Zc3h8Q9JJ48 Gm27322-201ENSMUST00000184007 104 ntBASIC25.35■■□□□ 1.65
Zc3h8Q9JJ48 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Zc3h8Q9JJ48 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Zc3h8Q9JJ48 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Zc3h8Q9JJ48 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
Zc3h8Q9JJ48 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.28■■□□□ 1.64
Zc3h8Q9JJ48 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Zc3h8Q9JJ48 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Zc3h8Q9JJ48 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.21■■□□□ 1.63
Zc3h8Q9JJ48 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.21■■□□□ 1.63
Zc3h8Q9JJ48 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.21■■□□□ 1.63
Zc3h8Q9JJ48 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Zc3h8Q9JJ48 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Zc3h8Q9JJ48 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Zc3h8Q9JJ48 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Zc3h8Q9JJ48 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.05■■□□□ 1.6
Zc3h8Q9JJ48 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Zc3h8Q9JJ48 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Zc3h8Q9JJ48 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.04■■□□□ 1.6
Zc3h8Q9JJ48 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Zc3h8Q9JJ48 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Zc3h8Q9JJ48 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Zc3h8Q9JJ48 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Zc3h8Q9JJ48 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Zc3h8Q9JJ48 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Zc3h8Q9JJ48 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Zc3h8Q9JJ48 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Zc3h8Q9JJ48 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.88■■□□□ 1.57
Zc3h8Q9JJ48 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Zc3h8Q9JJ48 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h8Q9JJ48 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h8Q9JJ48 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h8Q9JJ48 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Zc3h8Q9JJ48 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Zc3h8Q9JJ48 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Zc3h8Q9JJ48 Gm24804-201ENSMUST00000174982 85 ntBASIC24.8■■□□□ 1.56
Zc3h8Q9JJ48 Mipep-204ENSMUST00000225043 1548 ntBASIC24.77■■□□□ 1.56
Zc3h8Q9JJ48 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Zc3h8Q9JJ48 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Zc3h8Q9JJ48 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Zc3h8Q9JJ48 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3h8Q9JJ48 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3h8Q9JJ48 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Zc3h8Q9JJ48 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.69■■□□□ 1.54
Zc3h8Q9JJ48 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Zc3h8Q9JJ48 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Zc3h8Q9JJ48 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Zc3h8Q9JJ48 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Zc3h8Q9JJ48 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Zc3h8Q9JJ48 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Zc3h8Q9JJ48 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Zc3h8Q9JJ48 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zc3h8Q9JJ48 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Zc3h8Q9JJ48 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Zc3h8Q9JJ48 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Zc3h8Q9JJ48 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Zc3h8Q9JJ48 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Zc3h8Q9JJ48 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Zc3h8Q9JJ48 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Zc3h8Q9JJ48 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Zc3h8Q9JJ48 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.51■■□□□ 1.51
Zc3h8Q9JJ48 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Zc3h8Q9JJ48 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms