Protein–RNA interactions for Protein: Q9D236

Htra3, Serine protease HTRA3, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra3Q9D236 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
Htra3Q9D236 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Htra3Q9D236 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.73■■■□□ 2.67
Htra3Q9D236 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.73■■■□□ 2.67
Htra3Q9D236 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Htra3Q9D236 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.69■■■□□ 2.66
Htra3Q9D236 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.66■■■□□ 2.66
Htra3Q9D236 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Htra3Q9D236 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Htra3Q9D236 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Htra3Q9D236 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.6■■■□□ 2.65
Htra3Q9D236 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Htra3Q9D236 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.55■■■□□ 2.64
Htra3Q9D236 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Htra3Q9D236 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Htra3Q9D236 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Htra3Q9D236 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.46■■■□□ 2.63
Htra3Q9D236 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Htra3Q9D236 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Htra3Q9D236 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Htra3Q9D236 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Htra3Q9D236 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Htra3Q9D236 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.32■■■□□ 2.6
Htra3Q9D236 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Htra3Q9D236 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Htra3Q9D236 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.24■■■□□ 2.59
Htra3Q9D236 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.21■■■□□ 2.59
Htra3Q9D236 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Htra3Q9D236 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Htra3Q9D236 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Htra3Q9D236 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Htra3Q9D236 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.18■■■□□ 2.58
Htra3Q9D236 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.18■■■□□ 2.58
Htra3Q9D236 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Htra3Q9D236 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
Htra3Q9D236 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Htra3Q9D236 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Htra3Q9D236 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.02■■■□□ 2.56
Htra3Q9D236 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Htra3Q9D236 Gm16148-201ENSMUST00000119653 893 ntBASIC30.97■■■□□ 2.55
Htra3Q9D236 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Htra3Q9D236 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Htra3Q9D236 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.93■■■□□ 2.54
Htra3Q9D236 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Htra3Q9D236 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.89■■■□□ 2.54
Htra3Q9D236 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.89■■■□□ 2.54
Htra3Q9D236 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Htra3Q9D236 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Htra3Q9D236 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.88■■■□□ 2.53
Htra3Q9D236 Gm45855-201ENSMUST00000212546 880 ntBASIC30.85■■■□□ 2.53
Htra3Q9D236 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Htra3Q9D236 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
Htra3Q9D236 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Htra3Q9D236 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Htra3Q9D236 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Htra3Q9D236 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Htra3Q9D236 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Htra3Q9D236 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Htra3Q9D236 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Htra3Q9D236 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Htra3Q9D236 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.69■■■□□ 2.5
Htra3Q9D236 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.68■■■□□ 2.5
Htra3Q9D236 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Htra3Q9D236 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Htra3Q9D236 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Htra3Q9D236 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Htra3Q9D236 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Htra3Q9D236 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Htra3Q9D236 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Htra3Q9D236 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Htra3Q9D236 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Htra3Q9D236 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Htra3Q9D236 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Htra3Q9D236 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Htra3Q9D236 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Htra3Q9D236 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Htra3Q9D236 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Htra3Q9D236 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.44■■■□□ 2.46
Htra3Q9D236 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.43■■■□□ 2.46
Htra3Q9D236 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Htra3Q9D236 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Htra3Q9D236 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Htra3Q9D236 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Htra3Q9D236 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Htra3Q9D236 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.4■■■□□ 2.46
Htra3Q9D236 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
Htra3Q9D236 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Htra3Q9D236 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Htra3Q9D236 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Htra3Q9D236 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Htra3Q9D236 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Htra3Q9D236 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Htra3Q9D236 Psd-208ENSMUST00000224556 2034 ntBASIC30.32■■■□□ 2.44
Htra3Q9D236 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
Htra3Q9D236 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Htra3Q9D236 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.28■■■□□ 2.44
Htra3Q9D236 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Htra3Q9D236 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.25■■■□□ 2.43
Htra3Q9D236 Gm9397-201ENSMUST00000200125 605 ntBASIC30.22■■■□□ 2.43
Htra3Q9D236 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms