Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Gm27322-201ENSMUST00000184007 104 ntBASIC26.85■■□□□ 1.89
Msantd3Q9CR78 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.83■■□□□ 1.89
Msantd3Q9CR78 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Msantd3Q9CR78 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Msantd3Q9CR78 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Msantd3Q9CR78 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Msantd3Q9CR78 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Msantd3Q9CR78 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.75■■□□□ 1.87
Msantd3Q9CR78 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.75■■□□□ 1.87
Msantd3Q9CR78 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Msantd3Q9CR78 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Msantd3Q9CR78 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.67■■□□□ 1.86
Msantd3Q9CR78 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Msantd3Q9CR78 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Msantd3Q9CR78 Gm24804-201ENSMUST00000174982 85 ntBASIC26.66■■□□□ 1.86
Msantd3Q9CR78 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.6■■□□□ 1.85
Msantd3Q9CR78 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Msantd3Q9CR78 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Msantd3Q9CR78 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.53■■□□□ 1.84
Msantd3Q9CR78 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Msantd3Q9CR78 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.48■■□□□ 1.83
Msantd3Q9CR78 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Msantd3Q9CR78 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Msantd3Q9CR78 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Msantd3Q9CR78 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Msantd3Q9CR78 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Msantd3Q9CR78 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Msantd3Q9CR78 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Msantd3Q9CR78 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Msantd3Q9CR78 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.26■■□□□ 1.79
Msantd3Q9CR78 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Msantd3Q9CR78 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Msantd3Q9CR78 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Msantd3Q9CR78 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Msantd3Q9CR78 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.19■■□□□ 1.78
Msantd3Q9CR78 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Msantd3Q9CR78 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Msantd3Q9CR78 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.16■■□□□ 1.78
Msantd3Q9CR78 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Msantd3Q9CR78 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Msantd3Q9CR78 Zfp131-205ENSMUST00000223812 663 ntBASIC26.11■■□□□ 1.77
Msantd3Q9CR78 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.1■■□□□ 1.77
Msantd3Q9CR78 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Msantd3Q9CR78 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
Msantd3Q9CR78 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Msantd3Q9CR78 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.05■■□□□ 1.76
Msantd3Q9CR78 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Msantd3Q9CR78 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Msantd3Q9CR78 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msantd3Q9CR78 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Msantd3Q9CR78 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Msantd3Q9CR78 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26■■□□□ 1.75
Msantd3Q9CR78 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Msantd3Q9CR78 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Msantd3Q9CR78 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Msantd3Q9CR78 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Msantd3Q9CR78 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Msantd3Q9CR78 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Msantd3Q9CR78 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Msantd3Q9CR78 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Msantd3Q9CR78 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Msantd3Q9CR78 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Msantd3Q9CR78 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Msantd3Q9CR78 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.76■■□□□ 1.71
Msantd3Q9CR78 Gm16148-201ENSMUST00000119653 893 ntBASIC25.75■■□□□ 1.71
Msantd3Q9CR78 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.75■■□□□ 1.71
Msantd3Q9CR78 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msantd3Q9CR78 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msantd3Q9CR78 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msantd3Q9CR78 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Msantd3Q9CR78 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Msantd3Q9CR78 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Msantd3Q9CR78 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Msantd3Q9CR78 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Msantd3Q9CR78 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.67■■□□□ 1.7
Msantd3Q9CR78 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Msantd3Q9CR78 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Msantd3Q9CR78 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Msantd3Q9CR78 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Msantd3Q9CR78 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msantd3Q9CR78 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msantd3Q9CR78 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msantd3Q9CR78 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msantd3Q9CR78 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Msantd3Q9CR78 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Msantd3Q9CR78 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.57■■□□□ 1.68
Msantd3Q9CR78 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.57■■□□□ 1.68
Msantd3Q9CR78 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.56■■□□□ 1.68
Msantd3Q9CR78 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msantd3Q9CR78 Peli2-204ENSMUST00000226513 1320 ntBASIC25.56■■□□□ 1.68
Msantd3Q9CR78 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Msantd3Q9CR78 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Msantd3Q9CR78 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Msantd3Q9CR78 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
Msantd3Q9CR78 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Msantd3Q9CR78 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Msantd3Q9CR78 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Msantd3Q9CR78 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Msantd3Q9CR78 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Msantd3Q9CR78 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms