Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.81■■□□□ 1.88
Pcdhb20Q91XZ9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Pcdhb20Q91XZ9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhb20Q91XZ9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb20Q91XZ9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.76■■□□□ 1.87
Pcdhb20Q91XZ9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Pcdhb20Q91XZ9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb20Q91XZ9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Pcdhb20Q91XZ9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb20Q91XZ9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb20Q91XZ9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.67■■□□□ 1.86
Pcdhb20Q91XZ9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.65■■□□□ 1.86
Pcdhb20Q91XZ9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb20Q91XZ9 Gm26115-201ENSMUST00000175605 87 ntBASIC26.64■■□□□ 1.86
Pcdhb20Q91XZ9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb20Q91XZ9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb20Q91XZ9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb20Q91XZ9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Pcdhb20Q91XZ9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb20Q91XZ9 Gm8109-201ENSMUST00000194076 746 ntBASIC26.47■■□□□ 1.83
Pcdhb20Q91XZ9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhb20Q91XZ9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb20Q91XZ9 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.37■■□□□ 1.81
Pcdhb20Q91XZ9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.36■■□□□ 1.81
Pcdhb20Q91XZ9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Pcdhb20Q91XZ9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb20Q91XZ9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.31■■□□□ 1.8
Pcdhb20Q91XZ9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb20Q91XZ9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb20Q91XZ9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb20Q91XZ9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Pcdhb20Q91XZ9 Gm27322-201ENSMUST00000184007 104 ntBASIC26.26■■□□□ 1.79
Pcdhb20Q91XZ9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhb20Q91XZ9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Pcdhb20Q91XZ9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb20Q91XZ9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb20Q91XZ9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb20Q91XZ9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb20Q91XZ9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
Pcdhb20Q91XZ9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Pcdhb20Q91XZ9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Pcdhb20Q91XZ9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.11■■□□□ 1.77
Pcdhb20Q91XZ9 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.09■■□□□ 1.77
Pcdhb20Q91XZ9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb20Q91XZ9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb20Q91XZ9 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.03■■□□□ 1.76
Pcdhb20Q91XZ9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb20Q91XZ9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.02■■□□□ 1.76
Pcdhb20Q91XZ9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb20Q91XZ9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb20Q91XZ9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb20Q91XZ9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb20Q91XZ9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhb20Q91XZ9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb20Q91XZ9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb20Q91XZ9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Pcdhb20Q91XZ9 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.87■■□□□ 1.73
Pcdhb20Q91XZ9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb20Q91XZ9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.85■■□□□ 1.73
Pcdhb20Q91XZ9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb20Q91XZ9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb20Q91XZ9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb20Q91XZ9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb20Q91XZ9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.72■■□□□ 1.71
Pcdhb20Q91XZ9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb20Q91XZ9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb20Q91XZ9 Gm24804-201ENSMUST00000174982 85 ntBASIC25.68■■□□□ 1.7
Pcdhb20Q91XZ9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb20Q91XZ9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb20Q91XZ9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb20Q91XZ9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb20Q91XZ9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb20Q91XZ9 Mipep-204ENSMUST00000225043 1548 ntBASIC25.58■■□□□ 1.69
Pcdhb20Q91XZ9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb20Q91XZ9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdhb20Q91XZ9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb20Q91XZ9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Pcdhb20Q91XZ9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb20Q91XZ9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb20Q91XZ9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb20Q91XZ9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb20Q91XZ9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb20Q91XZ9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb20Q91XZ9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb20Q91XZ9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb20Q91XZ9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb20Q91XZ9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Pcdhb20Q91XZ9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb20Q91XZ9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb20Q91XZ9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdhb20Q91XZ9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb20Q91XZ9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb20Q91XZ9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb20Q91XZ9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Pcdhb20Q91XZ9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb20Q91XZ9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb20Q91XZ9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb20Q91XZ9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.32■■□□□ 1.64
Pcdhb20Q91XZ9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb20Q91XZ9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms