Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.31■■■□□ 2.44
TraipQ8VIG6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TraipQ8VIG6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
TraipQ8VIG6 Gm8109-201ENSMUST00000194076 746 ntBASIC30.28■■■□□ 2.44
TraipQ8VIG6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TraipQ8VIG6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TraipQ8VIG6 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.1■■■□□ 2.41
TraipQ8VIG6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TraipQ8VIG6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TraipQ8VIG6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TraipQ8VIG6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TraipQ8VIG6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
TraipQ8VIG6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TraipQ8VIG6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TraipQ8VIG6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
TraipQ8VIG6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.9■■■□□ 2.38
TraipQ8VIG6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.87■■■□□ 2.37
TraipQ8VIG6 Gm27322-201ENSMUST00000184007 104 ntBASIC29.85■■■□□ 2.37
TraipQ8VIG6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
TraipQ8VIG6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TraipQ8VIG6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TraipQ8VIG6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TraipQ8VIG6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TraipQ8VIG6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
TraipQ8VIG6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
TraipQ8VIG6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TraipQ8VIG6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
TraipQ8VIG6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TraipQ8VIG6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TraipQ8VIG6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
TraipQ8VIG6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
TraipQ8VIG6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TraipQ8VIG6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.6■■■□□ 2.33
TraipQ8VIG6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TraipQ8VIG6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TraipQ8VIG6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TraipQ8VIG6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
TraipQ8VIG6 Gm24804-201ENSMUST00000174982 85 ntBASIC29.42■■■□□ 2.3
TraipQ8VIG6 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.4■■■□□ 2.3
TraipQ8VIG6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
TraipQ8VIG6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
TraipQ8VIG6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.38■■■□□ 2.29
TraipQ8VIG6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
TraipQ8VIG6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.37■■■□□ 2.29
TraipQ8VIG6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.36■■■□□ 2.29
TraipQ8VIG6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TraipQ8VIG6 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.36■■■□□ 2.29
TraipQ8VIG6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
TraipQ8VIG6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TraipQ8VIG6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TraipQ8VIG6 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.3■■■□□ 2.28
TraipQ8VIG6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
TraipQ8VIG6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
TraipQ8VIG6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TraipQ8VIG6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
TraipQ8VIG6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TraipQ8VIG6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.11■■■□□ 2.25
TraipQ8VIG6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
TraipQ8VIG6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
TraipQ8VIG6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
TraipQ8VIG6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
TraipQ8VIG6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
TraipQ8VIG6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
TraipQ8VIG6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
TraipQ8VIG6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TraipQ8VIG6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TraipQ8VIG6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
TraipQ8VIG6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
TraipQ8VIG6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
TraipQ8VIG6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
TraipQ8VIG6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.87■■■□□ 2.21
TraipQ8VIG6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TraipQ8VIG6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
TraipQ8VIG6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
TraipQ8VIG6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TraipQ8VIG6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TraipQ8VIG6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TraipQ8VIG6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TraipQ8VIG6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.79■■■□□ 2.2
TraipQ8VIG6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.78■■■□□ 2.2
TraipQ8VIG6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
TraipQ8VIG6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TraipQ8VIG6 Mipep-204ENSMUST00000225043 1548 ntBASIC28.77■■■□□ 2.2
TraipQ8VIG6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
TraipQ8VIG6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TraipQ8VIG6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TraipQ8VIG6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
TraipQ8VIG6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TraipQ8VIG6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TraipQ8VIG6 Peli2-204ENSMUST00000226513 1320 ntBASIC28.67■■■□□ 2.18
TraipQ8VIG6 Zfp131-205ENSMUST00000223812 663 ntBASIC28.66■■■□□ 2.18
TraipQ8VIG6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TraipQ8VIG6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TraipQ8VIG6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TraipQ8VIG6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TraipQ8VIG6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
TraipQ8VIG6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
TraipQ8VIG6 Gm16148-201ENSMUST00000119653 893 ntBASIC28.56■■■□□ 2.16
TraipQ8VIG6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TraipQ8VIG6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms