Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rfpl4aQ8VH31 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.87■■□□□ 1.89
Rfpl4aQ8VH31 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.86■■□□□ 1.89
Rfpl4aQ8VH31 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rfpl4aQ8VH31 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rfpl4aQ8VH31 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rfpl4aQ8VH31 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rfpl4aQ8VH31 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rfpl4aQ8VH31 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.74■■□□□ 1.87
Rfpl4aQ8VH31 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Rfpl4aQ8VH31 Gm27322-201ENSMUST00000184007 104 ntBASIC26.71■■□□□ 1.87
Rfpl4aQ8VH31 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rfpl4aQ8VH31 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rfpl4aQ8VH31 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Rfpl4aQ8VH31 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.59■■□□□ 1.85
Rfpl4aQ8VH31 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rfpl4aQ8VH31 Gm24804-201ENSMUST00000174982 85 ntBASIC26.52■■□□□ 1.84
Rfpl4aQ8VH31 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rfpl4aQ8VH31 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rfpl4aQ8VH31 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Rfpl4aQ8VH31 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.42■■□□□ 1.82
Rfpl4aQ8VH31 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rfpl4aQ8VH31 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rfpl4aQ8VH31 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.37■■□□□ 1.81
Rfpl4aQ8VH31 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.36■■□□□ 1.81
Rfpl4aQ8VH31 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rfpl4aQ8VH31 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rfpl4aQ8VH31 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rfpl4aQ8VH31 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Rfpl4aQ8VH31 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rfpl4aQ8VH31 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Rfpl4aQ8VH31 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rfpl4aQ8VH31 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rfpl4aQ8VH31 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rfpl4aQ8VH31 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rfpl4aQ8VH31 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.14■■□□□ 1.78
Rfpl4aQ8VH31 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.13■■□□□ 1.77
Rfpl4aQ8VH31 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.11■■□□□ 1.77
Rfpl4aQ8VH31 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rfpl4aQ8VH31 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Rfpl4aQ8VH31 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rfpl4aQ8VH31 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rfpl4aQ8VH31 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rfpl4aQ8VH31 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rfpl4aQ8VH31 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rfpl4aQ8VH31 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rfpl4aQ8VH31 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rfpl4aQ8VH31 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rfpl4aQ8VH31 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Rfpl4aQ8VH31 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.98■■□□□ 1.75
Rfpl4aQ8VH31 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rfpl4aQ8VH31 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rfpl4aQ8VH31 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rfpl4aQ8VH31 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rfpl4aQ8VH31 Zfp131-205ENSMUST00000223812 663 ntBASIC25.9■■□□□ 1.74
Rfpl4aQ8VH31 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Rfpl4aQ8VH31 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rfpl4aQ8VH31 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Rfpl4aQ8VH31 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Rfpl4aQ8VH31 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rfpl4aQ8VH31 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.82■■□□□ 1.72
Rfpl4aQ8VH31 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rfpl4aQ8VH31 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rfpl4aQ8VH31 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rfpl4aQ8VH31 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rfpl4aQ8VH31 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rfpl4aQ8VH31 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rfpl4aQ8VH31 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Rfpl4aQ8VH31 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Rfpl4aQ8VH31 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rfpl4aQ8VH31 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.65■■□□□ 1.7
Rfpl4aQ8VH31 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Rfpl4aQ8VH31 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rfpl4aQ8VH31 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.59■■□□□ 1.69
Rfpl4aQ8VH31 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rfpl4aQ8VH31 Gm16148-201ENSMUST00000119653 893 ntBASIC25.58■■□□□ 1.69
Rfpl4aQ8VH31 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rfpl4aQ8VH31 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Rfpl4aQ8VH31 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Rfpl4aQ8VH31 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.56■■□□□ 1.68
Rfpl4aQ8VH31 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rfpl4aQ8VH31 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rfpl4aQ8VH31 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rfpl4aQ8VH31 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rfpl4aQ8VH31 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rfpl4aQ8VH31 Peli2-204ENSMUST00000226513 1320 ntBASIC25.51■■□□□ 1.67
Rfpl4aQ8VH31 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Rfpl4aQ8VH31 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.46■■□□□ 1.67
Rfpl4aQ8VH31 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rfpl4aQ8VH31 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rfpl4aQ8VH31 Mipep-204ENSMUST00000225043 1548 ntBASIC25.44■■□□□ 1.66
Rfpl4aQ8VH31 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rfpl4aQ8VH31 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rfpl4aQ8VH31 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Rfpl4aQ8VH31 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rfpl4aQ8VH31 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Rfpl4aQ8VH31 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
Rfpl4aQ8VH31 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rfpl4aQ8VH31 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rfpl4aQ8VH31 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms