Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sh3kbp1Q8R550 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sh3kbp1Q8R550 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sh3kbp1Q8R550 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Sh3kbp1Q8R550 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.5■■■□□ 2.15
Sh3kbp1Q8R550 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Sh3kbp1Q8R550 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.43■■■□□ 2.14
Sh3kbp1Q8R550 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Sh3kbp1Q8R550 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.34■■■□□ 2.13
Sh3kbp1Q8R550 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sh3kbp1Q8R550 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Sh3kbp1Q8R550 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Sh3kbp1Q8R550 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.26■■■□□ 2.11
Sh3kbp1Q8R550 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sh3kbp1Q8R550 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.24■■■□□ 2.11
Sh3kbp1Q8R550 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Sh3kbp1Q8R550 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Sh3kbp1Q8R550 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Sh3kbp1Q8R550 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sh3kbp1Q8R550 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sh3kbp1Q8R550 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.18■■■□□ 2.1
Sh3kbp1Q8R550 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Sh3kbp1Q8R550 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Sh3kbp1Q8R550 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Sh3kbp1Q8R550 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sh3kbp1Q8R550 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sh3kbp1Q8R550 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.06■■■□□ 2.08
Sh3kbp1Q8R550 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Sh3kbp1Q8R550 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Sh3kbp1Q8R550 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Sh3kbp1Q8R550 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Sh3kbp1Q8R550 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.01■■■□□ 2.07
Sh3kbp1Q8R550 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Sh3kbp1Q8R550 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Sh3kbp1Q8R550 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sh3kbp1Q8R550 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Sh3kbp1Q8R550 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sh3kbp1Q8R550 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Sh3kbp1Q8R550 Gm27322-201ENSMUST00000184007 104 ntBASIC27.94■■■□□ 2.06
Sh3kbp1Q8R550 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Sh3kbp1Q8R550 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sh3kbp1Q8R550 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Sh3kbp1Q8R550 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.84■■■□□ 2.05
Sh3kbp1Q8R550 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Sh3kbp1Q8R550 Gm24804-201ENSMUST00000174982 85 ntBASIC27.76■■■□□ 2.03
Sh3kbp1Q8R550 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sh3kbp1Q8R550 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sh3kbp1Q8R550 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.65■■■□□ 2.02
Sh3kbp1Q8R550 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Sh3kbp1Q8R550 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Sh3kbp1Q8R550 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Sh3kbp1Q8R550 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Sh3kbp1Q8R550 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Sh3kbp1Q8R550 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 2
Sh3kbp1Q8R550 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.56■■■□□ 2
Sh3kbp1Q8R550 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Sh3kbp1Q8R550 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
Sh3kbp1Q8R550 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Sh3kbp1Q8R550 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Sh3kbp1Q8R550 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.48■■□□□ 1.99
Sh3kbp1Q8R550 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Sh3kbp1Q8R550 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.45■■□□□ 1.98
Sh3kbp1Q8R550 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Sh3kbp1Q8R550 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Sh3kbp1Q8R550 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Sh3kbp1Q8R550 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Sh3kbp1Q8R550 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Sh3kbp1Q8R550 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.33■■□□□ 1.97
Sh3kbp1Q8R550 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.33■■□□□ 1.97
Sh3kbp1Q8R550 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sh3kbp1Q8R550 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sh3kbp1Q8R550 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Sh3kbp1Q8R550 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.31■■□□□ 1.96
Sh3kbp1Q8R550 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Sh3kbp1Q8R550 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Sh3kbp1Q8R550 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Sh3kbp1Q8R550 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Sh3kbp1Q8R550 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Sh3kbp1Q8R550 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sh3kbp1Q8R550 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sh3kbp1Q8R550 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.22■■□□□ 1.95
Sh3kbp1Q8R550 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sh3kbp1Q8R550 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Sh3kbp1Q8R550 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Sh3kbp1Q8R550 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Sh3kbp1Q8R550 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Sh3kbp1Q8R550 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sh3kbp1Q8R550 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sh3kbp1Q8R550 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Sh3kbp1Q8R550 Zfp131-205ENSMUST00000223812 663 ntBASIC27.07■■□□□ 1.92
Sh3kbp1Q8R550 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Sh3kbp1Q8R550 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Sh3kbp1Q8R550 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3kbp1Q8R550 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Sh3kbp1Q8R550 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sh3kbp1Q8R550 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Sh3kbp1Q8R550 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sh3kbp1Q8R550 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sh3kbp1Q8R550 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sh3kbp1Q8R550 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms