Protein–RNA interactions for Protein: Q8K375

Lrrc56, Leucine-rich repeat-containing protein 56, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc56Q8K375 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Lrrc56Q8K375 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Lrrc56Q8K375 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.72■■■□□ 2.67
Lrrc56Q8K375 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
Lrrc56Q8K375 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.69■■■□□ 2.66
Lrrc56Q8K375 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.67■■■□□ 2.66
Lrrc56Q8K375 Gm27322-201ENSMUST00000184007 104 ntBASIC31.66■■■□□ 2.66
Lrrc56Q8K375 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Lrrc56Q8K375 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.59■■■□□ 2.65
Lrrc56Q8K375 Gm24804-201ENSMUST00000174982 85 ntBASIC31.58■■■□□ 2.65
Lrrc56Q8K375 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.56■■■□□ 2.64
Lrrc56Q8K375 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
Lrrc56Q8K375 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Lrrc56Q8K375 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Lrrc56Q8K375 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Lrrc56Q8K375 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Lrrc56Q8K375 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.39■■■□□ 2.62
Lrrc56Q8K375 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Lrrc56Q8K375 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Lrrc56Q8K375 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Lrrc56Q8K375 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Lrrc56Q8K375 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.19■■■□□ 2.58
Lrrc56Q8K375 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Lrrc56Q8K375 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Lrrc56Q8K375 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Lrrc56Q8K375 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Lrrc56Q8K375 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.03■■■□□ 2.56
Lrrc56Q8K375 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Lrrc56Q8K375 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.01■■■□□ 2.55
Lrrc56Q8K375 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Lrrc56Q8K375 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Lrrc56Q8K375 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Lrrc56Q8K375 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Lrrc56Q8K375 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Lrrc56Q8K375 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
Lrrc56Q8K375 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.92■■■□□ 2.54
Lrrc56Q8K375 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Lrrc56Q8K375 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Lrrc56Q8K375 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.9■■■□□ 2.54
Lrrc56Q8K375 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Lrrc56Q8K375 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Lrrc56Q8K375 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Lrrc56Q8K375 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Lrrc56Q8K375 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.84■■■□□ 2.53
Lrrc56Q8K375 Zfp131-205ENSMUST00000223812 663 ntBASIC30.84■■■□□ 2.53
Lrrc56Q8K375 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Lrrc56Q8K375 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Lrrc56Q8K375 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Lrrc56Q8K375 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Lrrc56Q8K375 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Lrrc56Q8K375 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Lrrc56Q8K375 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Lrrc56Q8K375 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Lrrc56Q8K375 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Lrrc56Q8K375 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Lrrc56Q8K375 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.55■■■□□ 2.48
Lrrc56Q8K375 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Lrrc56Q8K375 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Lrrc56Q8K375 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
Lrrc56Q8K375 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Lrrc56Q8K375 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lrrc56Q8K375 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Lrrc56Q8K375 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Lrrc56Q8K375 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.45■■■□□ 2.47
Lrrc56Q8K375 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Lrrc56Q8K375 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Lrrc56Q8K375 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.41■■■□□ 2.46
Lrrc56Q8K375 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Lrrc56Q8K375 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Lrrc56Q8K375 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Lrrc56Q8K375 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
Lrrc56Q8K375 Gm16148-201ENSMUST00000119653 893 ntBASIC30.3■■■□□ 2.44
Lrrc56Q8K375 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.28■■■□□ 2.44
Lrrc56Q8K375 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Lrrc56Q8K375 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Lrrc56Q8K375 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Lrrc56Q8K375 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Lrrc56Q8K375 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Lrrc56Q8K375 Peli2-204ENSMUST00000226513 1320 ntBASIC30.21■■■□□ 2.43
Lrrc56Q8K375 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lrrc56Q8K375 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Lrrc56Q8K375 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Lrrc56Q8K375 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Lrrc56Q8K375 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Lrrc56Q8K375 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Lrrc56Q8K375 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Lrrc56Q8K375 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Lrrc56Q8K375 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.11■■■□□ 2.41
Lrrc56Q8K375 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
Lrrc56Q8K375 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Lrrc56Q8K375 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Lrrc56Q8K375 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Lrrc56Q8K375 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.04■■■□□ 2.4
Lrrc56Q8K375 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.04■■■□□ 2.4
Lrrc56Q8K375 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Lrrc56Q8K375 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Lrrc56Q8K375 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Lrrc56Q8K375 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lrrc56Q8K375 Mipep-204ENSMUST00000225043 1548 ntBASIC29.98■■■□□ 2.39
Lrrc56Q8K375 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms