Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.67■■□□□ 1.86
Cdk5rap1Q8BTW8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cdk5rap1Q8BTW8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Cdk5rap1Q8BTW8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cdk5rap1Q8BTW8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cdk5rap1Q8BTW8 Gm8109-201ENSMUST00000194076 746 ntBASIC26.58■■□□□ 1.85
Cdk5rap1Q8BTW8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cdk5rap1Q8BTW8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cdk5rap1Q8BTW8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Cdk5rap1Q8BTW8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdk5rap1Q8BTW8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cdk5rap1Q8BTW8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cdk5rap1Q8BTW8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cdk5rap1Q8BTW8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdk5rap1Q8BTW8 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.4■■□□□ 1.82
Cdk5rap1Q8BTW8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.39■■□□□ 1.81
Cdk5rap1Q8BTW8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdk5rap1Q8BTW8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cdk5rap1Q8BTW8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cdk5rap1Q8BTW8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cdk5rap1Q8BTW8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.32■■□□□ 1.8
Cdk5rap1Q8BTW8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.32■■□□□ 1.8
Cdk5rap1Q8BTW8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cdk5rap1Q8BTW8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Cdk5rap1Q8BTW8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cdk5rap1Q8BTW8 Gm27322-201ENSMUST00000184007 104 ntBASIC26.23■■□□□ 1.79
Cdk5rap1Q8BTW8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Cdk5rap1Q8BTW8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Cdk5rap1Q8BTW8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Cdk5rap1Q8BTW8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cdk5rap1Q8BTW8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Cdk5rap1Q8BTW8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.02■■□□□ 1.76
Cdk5rap1Q8BTW8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cdk5rap1Q8BTW8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cdk5rap1Q8BTW8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cdk5rap1Q8BTW8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cdk5rap1Q8BTW8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cdk5rap1Q8BTW8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Cdk5rap1Q8BTW8 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.9■■□□□ 1.74
Cdk5rap1Q8BTW8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cdk5rap1Q8BTW8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Cdk5rap1Q8BTW8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Cdk5rap1Q8BTW8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cdk5rap1Q8BTW8 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.84■■□□□ 1.73
Cdk5rap1Q8BTW8 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.82■■□□□ 1.72
Cdk5rap1Q8BTW8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cdk5rap1Q8BTW8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cdk5rap1Q8BTW8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Cdk5rap1Q8BTW8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.78■■□□□ 1.72
Cdk5rap1Q8BTW8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.78■■□□□ 1.72
Cdk5rap1Q8BTW8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cdk5rap1Q8BTW8 Gm24804-201ENSMUST00000174982 85 ntBASIC25.77■■□□□ 1.72
Cdk5rap1Q8BTW8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cdk5rap1Q8BTW8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cdk5rap1Q8BTW8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.75■■□□□ 1.71
Cdk5rap1Q8BTW8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cdk5rap1Q8BTW8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Cdk5rap1Q8BTW8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.72■■□□□ 1.71
Cdk5rap1Q8BTW8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.7■■□□□ 1.7
Cdk5rap1Q8BTW8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Cdk5rap1Q8BTW8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Cdk5rap1Q8BTW8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cdk5rap1Q8BTW8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cdk5rap1Q8BTW8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdk5rap1Q8BTW8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cdk5rap1Q8BTW8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cdk5rap1Q8BTW8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cdk5rap1Q8BTW8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdk5rap1Q8BTW8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdk5rap1Q8BTW8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdk5rap1Q8BTW8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Cdk5rap1Q8BTW8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cdk5rap1Q8BTW8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Cdk5rap1Q8BTW8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cdk5rap1Q8BTW8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cdk5rap1Q8BTW8 Mipep-204ENSMUST00000225043 1548 ntBASIC25.37■■□□□ 1.65
Cdk5rap1Q8BTW8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cdk5rap1Q8BTW8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cdk5rap1Q8BTW8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cdk5rap1Q8BTW8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.35■■□□□ 1.65
Cdk5rap1Q8BTW8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Cdk5rap1Q8BTW8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cdk5rap1Q8BTW8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cdk5rap1Q8BTW8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cdk5rap1Q8BTW8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdk5rap1Q8BTW8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cdk5rap1Q8BTW8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cdk5rap1Q8BTW8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cdk5rap1Q8BTW8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cdk5rap1Q8BTW8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdk5rap1Q8BTW8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cdk5rap1Q8BTW8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Cdk5rap1Q8BTW8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cdk5rap1Q8BTW8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cdk5rap1Q8BTW8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Cdk5rap1Q8BTW8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cdk5rap1Q8BTW8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.17■■□□□ 1.62
Cdk5rap1Q8BTW8 Peli2-204ENSMUST00000226513 1320 ntBASIC25.16■■□□□ 1.62
Cdk5rap1Q8BTW8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cdk5rap1Q8BTW8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms