Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
Slc43a1Q8BSM7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.64■■■□□ 2.18
Slc43a1Q8BSM7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Slc43a1Q8BSM7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Slc43a1Q8BSM7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Slc43a1Q8BSM7 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.5■■■□□ 2.15
Slc43a1Q8BSM7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Slc43a1Q8BSM7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Slc43a1Q8BSM7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Slc43a1Q8BSM7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Slc43a1Q8BSM7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.34■■■□□ 2.13
Slc43a1Q8BSM7 Gm27322-201ENSMUST00000184007 104 ntBASIC28.34■■■□□ 2.13
Slc43a1Q8BSM7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Slc43a1Q8BSM7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Slc43a1Q8BSM7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Slc43a1Q8BSM7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Slc43a1Q8BSM7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Slc43a1Q8BSM7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.14■■■□□ 2.1
Slc43a1Q8BSM7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc43a1Q8BSM7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc43a1Q8BSM7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc43a1Q8BSM7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Slc43a1Q8BSM7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc43a1Q8BSM7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.02■■■□□ 2.08
Slc43a1Q8BSM7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc43a1Q8BSM7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Slc43a1Q8BSM7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Slc43a1Q8BSM7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.97■■■□□ 2.07
Slc43a1Q8BSM7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Slc43a1Q8BSM7 Gm24804-201ENSMUST00000174982 85 ntBASIC27.95■■■□□ 2.06
Slc43a1Q8BSM7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Slc43a1Q8BSM7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.91■■■□□ 2.06
Slc43a1Q8BSM7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.9■■■□□ 2.06
Slc43a1Q8BSM7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Slc43a1Q8BSM7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Slc43a1Q8BSM7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Slc43a1Q8BSM7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Slc43a1Q8BSM7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Slc43a1Q8BSM7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Slc43a1Q8BSM7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Slc43a1Q8BSM7 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.79■■■□□ 2.04
Slc43a1Q8BSM7 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.76■■■□□ 2.03
Slc43a1Q8BSM7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Slc43a1Q8BSM7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Slc43a1Q8BSM7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.7■■■□□ 2.02
Slc43a1Q8BSM7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Slc43a1Q8BSM7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Slc43a1Q8BSM7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Slc43a1Q8BSM7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Slc43a1Q8BSM7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Slc43a1Q8BSM7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Slc43a1Q8BSM7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Slc43a1Q8BSM7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Slc43a1Q8BSM7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.56■■■□□ 2
Slc43a1Q8BSM7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Slc43a1Q8BSM7 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.55■■■□□ 2
Slc43a1Q8BSM7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Slc43a1Q8BSM7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.52■■■□□ 2
Slc43a1Q8BSM7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Slc43a1Q8BSM7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Slc43a1Q8BSM7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.43■■□□□ 1.98
Slc43a1Q8BSM7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Slc43a1Q8BSM7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Slc43a1Q8BSM7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Slc43a1Q8BSM7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Slc43a1Q8BSM7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Slc43a1Q8BSM7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.32■■□□□ 1.96
Slc43a1Q8BSM7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Slc43a1Q8BSM7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Slc43a1Q8BSM7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Slc43a1Q8BSM7 Zfp131-205ENSMUST00000223812 663 ntBASIC27.28■■□□□ 1.96
Slc43a1Q8BSM7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Slc43a1Q8BSM7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Slc43a1Q8BSM7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Slc43a1Q8BSM7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Slc43a1Q8BSM7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Slc43a1Q8BSM7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Slc43a1Q8BSM7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Slc43a1Q8BSM7 Gm16148-201ENSMUST00000119653 893 ntBASIC27.14■■□□□ 1.94
Slc43a1Q8BSM7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Slc43a1Q8BSM7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Slc43a1Q8BSM7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Slc43a1Q8BSM7 Mipep-204ENSMUST00000225043 1548 ntBASIC27.14■■□□□ 1.94
Slc43a1Q8BSM7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Slc43a1Q8BSM7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Slc43a1Q8BSM7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Slc43a1Q8BSM7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.11■■□□□ 1.93
Slc43a1Q8BSM7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Slc43a1Q8BSM7 Peli2-204ENSMUST00000226513 1320 ntBASIC27.08■■□□□ 1.93
Slc43a1Q8BSM7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Slc43a1Q8BSM7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Slc43a1Q8BSM7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.06■■□□□ 1.92
Slc43a1Q8BSM7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Slc43a1Q8BSM7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Slc43a1Q8BSM7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.03■■□□□ 1.92
Slc43a1Q8BSM7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Slc43a1Q8BSM7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Slc43a1Q8BSM7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.01■■□□□ 1.91
Slc43a1Q8BSM7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Slc43a1Q8BSM7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms