Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Gm25239-201ENSMUST00000174915 86 ntBASIC39.35■■■■□ 3.89
Slc43a1Q8BSM7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Slc43a1Q8BSM7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Slc43a1Q8BSM7 Gm15042-201ENSMUST00000120212 883 ntBASIC34.4■■■■□ 3.1
Slc43a1Q8BSM7 Gm24109-201ENSMUST00000175489 103 ntBASIC34.06■■■■□ 3.04
Slc43a1Q8BSM7 Gm15045-201ENSMUST00000117359 883 ntBASIC33.58■■■□□ 2.97
Slc43a1Q8BSM7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Slc43a1Q8BSM7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Slc43a1Q8BSM7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Slc43a1Q8BSM7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Slc43a1Q8BSM7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Slc43a1Q8BSM7 Gm23366-201ENSMUST00000175022 89 ntBASIC32.91■■■□□ 2.86
Slc43a1Q8BSM7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Slc43a1Q8BSM7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Slc43a1Q8BSM7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Slc43a1Q8BSM7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Slc43a1Q8BSM7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.79■■■□□ 2.68
Slc43a1Q8BSM7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Slc43a1Q8BSM7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Slc43a1Q8BSM7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.68■■■□□ 2.66
Slc43a1Q8BSM7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.56■■■□□ 2.64
Slc43a1Q8BSM7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Slc43a1Q8BSM7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.49■■■□□ 2.63
Slc43a1Q8BSM7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Slc43a1Q8BSM7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Slc43a1Q8BSM7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Slc43a1Q8BSM7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Slc43a1Q8BSM7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Slc43a1Q8BSM7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Slc43a1Q8BSM7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slc43a1Q8BSM7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.12■■■□□ 2.57
Slc43a1Q8BSM7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.04■■■□□ 2.56
Slc43a1Q8BSM7 Gm25238-201ENSMUST00000174914 89 ntBASIC31.04■■■□□ 2.56
Slc43a1Q8BSM7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Slc43a1Q8BSM7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Slc43a1Q8BSM7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slc43a1Q8BSM7 Psd-208ENSMUST00000224556 2034 ntBASIC30.73■■■□□ 2.51
Slc43a1Q8BSM7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
Slc43a1Q8BSM7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.48■■■□□ 2.47
Slc43a1Q8BSM7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Slc43a1Q8BSM7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.32■■■□□ 2.44
Slc43a1Q8BSM7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Slc43a1Q8BSM7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.15■■■□□ 2.42
Slc43a1Q8BSM7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Slc43a1Q8BSM7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Slc43a1Q8BSM7 Gm27325-201ENSMUST00000175467 74 ntBASIC30.13■■■□□ 2.41
Slc43a1Q8BSM7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
Slc43a1Q8BSM7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Slc43a1Q8BSM7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.99■■■□□ 2.39
Slc43a1Q8BSM7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Slc43a1Q8BSM7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.94■■■□□ 2.38
Slc43a1Q8BSM7 Gm25262-201ENSMUST00000174934 133 ntBASIC29.82■■■□□ 2.36
Slc43a1Q8BSM7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Slc43a1Q8BSM7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.68■■■□□ 2.34
Slc43a1Q8BSM7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.63■■■□□ 2.33
Slc43a1Q8BSM7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Slc43a1Q8BSM7 Rab21-202ENSMUST00000218831 843 ntBASIC29.62■■■□□ 2.33
Slc43a1Q8BSM7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Slc43a1Q8BSM7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Slc43a1Q8BSM7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.55■■■□□ 2.32
Slc43a1Q8BSM7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Slc43a1Q8BSM7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Slc43a1Q8BSM7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Slc43a1Q8BSM7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.37■■■□□ 2.29
Slc43a1Q8BSM7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.34■■■□□ 2.29
Slc43a1Q8BSM7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Slc43a1Q8BSM7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.24■■■□□ 2.27
Slc43a1Q8BSM7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.23■■■□□ 2.27
Slc43a1Q8BSM7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Slc43a1Q8BSM7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Slc43a1Q8BSM7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Slc43a1Q8BSM7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Slc43a1Q8BSM7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Slc43a1Q8BSM7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Slc43a1Q8BSM7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.12■■■□□ 2.25
Slc43a1Q8BSM7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc43a1Q8BSM7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc43a1Q8BSM7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc43a1Q8BSM7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Slc43a1Q8BSM7 Gm26115-201ENSMUST00000175605 87 ntBASIC29.08■■■□□ 2.25
Slc43a1Q8BSM7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Slc43a1Q8BSM7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.02■■■□□ 2.24
Slc43a1Q8BSM7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Slc43a1Q8BSM7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Slc43a1Q8BSM7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Slc43a1Q8BSM7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Slc43a1Q8BSM7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Slc43a1Q8BSM7 Gm8109-201ENSMUST00000194076 746 ntBASIC28.88■■■□□ 2.21
Slc43a1Q8BSM7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Slc43a1Q8BSM7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.86■■■□□ 2.21
Slc43a1Q8BSM7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Slc43a1Q8BSM7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.86■■■□□ 2.21
Slc43a1Q8BSM7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Slc43a1Q8BSM7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Slc43a1Q8BSM7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.77■■■□□ 2.2
Slc43a1Q8BSM7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.76■■■□□ 2.19
Slc43a1Q8BSM7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.72■■■□□ 2.19
Slc43a1Q8BSM7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Slc43a1Q8BSM7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Slc43a1Q8BSM7 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.68■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms