Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.87■■□□□ 1.89
Vrk1Q80X41 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vrk1Q80X41 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.75■■□□□ 1.87
Vrk1Q80X41 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Vrk1Q80X41 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Vrk1Q80X41 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.72■■□□□ 1.87
Vrk1Q80X41 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Vrk1Q80X41 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Vrk1Q80X41 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Vrk1Q80X41 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Vrk1Q80X41 Gm27322-201ENSMUST00000184007 104 ntBASIC26.67■■□□□ 1.86
Vrk1Q80X41 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.66■■□□□ 1.86
Vrk1Q80X41 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Vrk1Q80X41 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vrk1Q80X41 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Vrk1Q80X41 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vrk1Q80X41 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.55■■□□□ 1.84
Vrk1Q80X41 Gm24804-201ENSMUST00000174982 85 ntBASIC26.47■■□□□ 1.83
Vrk1Q80X41 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vrk1Q80X41 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Vrk1Q80X41 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.36■■□□□ 1.81
Vrk1Q80X41 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Vrk1Q80X41 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Vrk1Q80X41 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vrk1Q80X41 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vrk1Q80X41 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.31■■□□□ 1.8
Vrk1Q80X41 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Vrk1Q80X41 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vrk1Q80X41 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.24■■□□□ 1.79
Vrk1Q80X41 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Vrk1Q80X41 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vrk1Q80X41 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Vrk1Q80X41 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Vrk1Q80X41 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vrk1Q80X41 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vrk1Q80X41 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Vrk1Q80X41 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Vrk1Q80X41 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.05■■□□□ 1.76
Vrk1Q80X41 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Vrk1Q80X41 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vrk1Q80X41 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vrk1Q80X41 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vrk1Q80X41 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.02■■□□□ 1.76
Vrk1Q80X41 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.02■■□□□ 1.76
Vrk1Q80X41 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Vrk1Q80X41 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Vrk1Q80X41 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26■■□□□ 1.75
Vrk1Q80X41 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Vrk1Q80X41 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Vrk1Q80X41 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Vrk1Q80X41 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Vrk1Q80X41 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Vrk1Q80X41 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Vrk1Q80X41 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Vrk1Q80X41 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.92■■□□□ 1.74
Vrk1Q80X41 Zfp131-205ENSMUST00000223812 663 ntBASIC25.86■■□□□ 1.73
Vrk1Q80X41 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Vrk1Q80X41 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Vrk1Q80X41 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Vrk1Q80X41 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Vrk1Q80X41 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Vrk1Q80X41 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Vrk1Q80X41 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Vrk1Q80X41 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.69■■□□□ 1.7
Vrk1Q80X41 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.66■■□□□ 1.7
Vrk1Q80X41 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Vrk1Q80X41 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Vrk1Q80X41 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Vrk1Q80X41 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Vrk1Q80X41 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Vrk1Q80X41 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Vrk1Q80X41 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Vrk1Q80X41 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.58■■□□□ 1.69
Vrk1Q80X41 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Vrk1Q80X41 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vrk1Q80X41 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Vrk1Q80X41 Gm16148-201ENSMUST00000119653 893 ntBASIC25.53■■□□□ 1.68
Vrk1Q80X41 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.52■■□□□ 1.68
Vrk1Q80X41 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Vrk1Q80X41 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Vrk1Q80X41 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Vrk1Q80X41 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Vrk1Q80X41 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Vrk1Q80X41 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Vrk1Q80X41 Peli2-204ENSMUST00000226513 1320 ntBASIC25.43■■□□□ 1.66
Vrk1Q80X41 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Vrk1Q80X41 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.42■■□□□ 1.66
Vrk1Q80X41 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Vrk1Q80X41 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vrk1Q80X41 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vrk1Q80X41 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Vrk1Q80X41 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Vrk1Q80X41 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vrk1Q80X41 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Vrk1Q80X41 Mipep-204ENSMUST00000225043 1548 ntBASIC25.34■■□□□ 1.65
Vrk1Q80X41 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.34■■□□□ 1.65
Vrk1Q80X41 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Vrk1Q80X41 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.33■■□□□ 1.65
Vrk1Q80X41 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Vrk1Q80X41 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms