Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.93■■■□□ 2.22
Trim62Q80V85 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Trim62Q80V85 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.89■■■□□ 2.22
Trim62Q80V85 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Trim62Q80V85 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Trim62Q80V85 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.84■■■□□ 2.21
Trim62Q80V85 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Trim62Q80V85 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Trim62Q80V85 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Trim62Q80V85 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.78■■■□□ 2.2
Trim62Q80V85 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Trim62Q80V85 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
Trim62Q80V85 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.69■■■□□ 2.18
Trim62Q80V85 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Trim62Q80V85 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
Trim62Q80V85 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Trim62Q80V85 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.58■■■□□ 2.17
Trim62Q80V85 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Trim62Q80V85 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.57■■■□□ 2.16
Trim62Q80V85 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Trim62Q80V85 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Trim62Q80V85 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Trim62Q80V85 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Trim62Q80V85 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Trim62Q80V85 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Trim62Q80V85 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Trim62Q80V85 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim62Q80V85 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Trim62Q80V85 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trim62Q80V85 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Trim62Q80V85 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Trim62Q80V85 Gm26115-201ENSMUST00000175605 87 ntBASIC28.34■■■□□ 2.13
Trim62Q80V85 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.32■■■□□ 2.12
Trim62Q80V85 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim62Q80V85 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.29■■■□□ 2.12
Trim62Q80V85 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim62Q80V85 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.28■■■□□ 2.12
Trim62Q80V85 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Trim62Q80V85 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.27■■■□□ 2.12
Trim62Q80V85 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Trim62Q80V85 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim62Q80V85 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trim62Q80V85 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Trim62Q80V85 Gm27322-201ENSMUST00000184007 104 ntBASIC28.16■■■□□ 2.1
Trim62Q80V85 Gm8109-201ENSMUST00000194076 746 ntBASIC28.16■■■□□ 2.1
Trim62Q80V85 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Trim62Q80V85 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trim62Q80V85 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim62Q80V85 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.1■■■□□ 2.09
Trim62Q80V85 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.09■■■□□ 2.09
Trim62Q80V85 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Trim62Q80V85 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.07■■■□□ 2.08
Trim62Q80V85 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Trim62Q80V85 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Trim62Q80V85 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Trim62Q80V85 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trim62Q80V85 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim62Q80V85 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Trim62Q80V85 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trim62Q80V85 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim62Q80V85 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Trim62Q80V85 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Trim62Q80V85 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.87■■■□□ 2.05
Trim62Q80V85 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trim62Q80V85 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Trim62Q80V85 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.84■■■□□ 2.05
Trim62Q80V85 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Trim62Q80V85 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Trim62Q80V85 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim62Q80V85 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim62Q80V85 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim62Q80V85 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim62Q80V85 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim62Q80V85 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim62Q80V85 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Trim62Q80V85 Mipep-204ENSMUST00000225043 1548 ntBASIC27.69■■■□□ 2.02
Trim62Q80V85 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim62Q80V85 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Trim62Q80V85 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Trim62Q80V85 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Trim62Q80V85 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Trim62Q80V85 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Trim62Q80V85 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Trim62Q80V85 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Trim62Q80V85 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.53■■■□□ 2
Trim62Q80V85 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trim62Q80V85 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Trim62Q80V85 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trim62Q80V85 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Trim62Q80V85 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.48■■□□□ 1.99
Trim62Q80V85 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.43■■□□□ 1.98
Trim62Q80V85 Gm24804-201ENSMUST00000174982 85 ntBASIC27.43■■□□□ 1.98
Trim62Q80V85 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trim62Q80V85 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Trim62Q80V85 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim62Q80V85 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim62Q80V85 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Trim62Q80V85 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim62Q80V85 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim62Q80V85 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms