Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.77■■■□□ 2.52
Ush1gQ80T11 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ush1gQ80T11 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.71■■■□□ 2.51
Ush1gQ80T11 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.67■■■□□ 2.5
Ush1gQ80T11 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ush1gQ80T11 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.64■■■□□ 2.5
Ush1gQ80T11 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.57■■■□□ 2.48
Ush1gQ80T11 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ush1gQ80T11 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
Ush1gQ80T11 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ush1gQ80T11 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ush1gQ80T11 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Ush1gQ80T11 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
Ush1gQ80T11 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.49■■■□□ 2.47
Ush1gQ80T11 Gm27322-201ENSMUST00000184007 104 ntBASIC30.48■■■□□ 2.47
Ush1gQ80T11 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ush1gQ80T11 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Ush1gQ80T11 Gm24804-201ENSMUST00000174982 85 ntBASIC30.38■■■□□ 2.45
Ush1gQ80T11 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ush1gQ80T11 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.32■■■□□ 2.44
Ush1gQ80T11 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ush1gQ80T11 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ush1gQ80T11 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ush1gQ80T11 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.18■■■□□ 2.42
Ush1gQ80T11 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ush1gQ80T11 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ush1gQ80T11 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ush1gQ80T11 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ush1gQ80T11 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ush1gQ80T11 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ush1gQ80T11 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ush1gQ80T11 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.03■■■□□ 2.4
Ush1gQ80T11 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.03■■■□□ 2.4
Ush1gQ80T11 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ush1gQ80T11 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.97■■■□□ 2.39
Ush1gQ80T11 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ush1gQ80T11 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ush1gQ80T11 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
Ush1gQ80T11 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Ush1gQ80T11 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.92■■■□□ 2.38
Ush1gQ80T11 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Ush1gQ80T11 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ush1gQ80T11 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ush1gQ80T11 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ush1gQ80T11 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Ush1gQ80T11 Zfp131-205ENSMUST00000223812 663 ntBASIC29.79■■■□□ 2.36
Ush1gQ80T11 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ush1gQ80T11 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ush1gQ80T11 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ush1gQ80T11 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ush1gQ80T11 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ush1gQ80T11 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Ush1gQ80T11 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ush1gQ80T11 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.67■■■□□ 2.34
Ush1gQ80T11 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ush1gQ80T11 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.65■■■□□ 2.34
Ush1gQ80T11 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ush1gQ80T11 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Ush1gQ80T11 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ush1gQ80T11 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ush1gQ80T11 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ush1gQ80T11 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ush1gQ80T11 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ush1gQ80T11 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ush1gQ80T11 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Ush1gQ80T11 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ush1gQ80T11 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.5■■■□□ 2.31
Ush1gQ80T11 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ush1gQ80T11 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.46■■■□□ 2.31
Ush1gQ80T11 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ush1gQ80T11 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ush1gQ80T11 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ush1gQ80T11 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ush1gQ80T11 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ush1gQ80T11 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.41■■■□□ 2.3
Ush1gQ80T11 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.36■■■□□ 2.29
Ush1gQ80T11 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ush1gQ80T11 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Ush1gQ80T11 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ush1gQ80T11 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.31■■■□□ 2.28
Ush1gQ80T11 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.29■■■□□ 2.28
Ush1gQ80T11 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ush1gQ80T11 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ush1gQ80T11 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ush1gQ80T11 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ush1gQ80T11 Gm16148-201ENSMUST00000119653 893 ntBASIC29.23■■■□□ 2.27
Ush1gQ80T11 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ush1gQ80T11 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Ush1gQ80T11 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ush1gQ80T11 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ush1gQ80T11 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ush1gQ80T11 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Ush1gQ80T11 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ush1gQ80T11 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ush1gQ80T11 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Ush1gQ80T11 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ush1gQ80T11 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ush1gQ80T11 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ush1gQ80T11 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ush1gQ80T11 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms