Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pif1Q80SX8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pif1Q80SX8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Pif1Q80SX8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pif1Q80SX8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pif1Q80SX8 Gm27322-201ENSMUST00000184007 104 ntBASIC25.75■■□□□ 1.71
Pif1Q80SX8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pif1Q80SX8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pif1Q80SX8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pif1Q80SX8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.7■■□□□ 1.7
Pif1Q80SX8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.69■■□□□ 1.7
Pif1Q80SX8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.65■■□□□ 1.7
Pif1Q80SX8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pif1Q80SX8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pif1Q80SX8 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.63■■□□□ 1.69
Pif1Q80SX8 Gm24804-201ENSMUST00000174982 85 ntBASIC25.58■■□□□ 1.69
Pif1Q80SX8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pif1Q80SX8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pif1Q80SX8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.45■■□□□ 1.66
Pif1Q80SX8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pif1Q80SX8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pif1Q80SX8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pif1Q80SX8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.36■■□□□ 1.65
Pif1Q80SX8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pif1Q80SX8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pif1Q80SX8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pif1Q80SX8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pif1Q80SX8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pif1Q80SX8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pif1Q80SX8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pif1Q80SX8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.2■■□□□ 1.62
Pif1Q80SX8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pif1Q80SX8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.18■■□□□ 1.62
Pif1Q80SX8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pif1Q80SX8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pif1Q80SX8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pif1Q80SX8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pif1Q80SX8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pif1Q80SX8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pif1Q80SX8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pif1Q80SX8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pif1Q80SX8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pif1Q80SX8 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.09■■□□□ 1.61
Pif1Q80SX8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pif1Q80SX8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pif1Q80SX8 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.05■■□□□ 1.6
Pif1Q80SX8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Pif1Q80SX8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pif1Q80SX8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.03■■□□□ 1.6
Pif1Q80SX8 Zfp131-205ENSMUST00000223812 663 ntBASIC25.01■■□□□ 1.59
Pif1Q80SX8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pif1Q80SX8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pif1Q80SX8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pif1Q80SX8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Pif1Q80SX8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Pif1Q80SX8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Pif1Q80SX8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pif1Q80SX8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.86■■□□□ 1.57
Pif1Q80SX8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pif1Q80SX8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pif1Q80SX8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pif1Q80SX8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pif1Q80SX8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pif1Q80SX8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pif1Q80SX8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.75■■□□□ 1.55
Pif1Q80SX8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pif1Q80SX8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pif1Q80SX8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Pif1Q80SX8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pif1Q80SX8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pif1Q80SX8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pif1Q80SX8 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.66■■□□□ 1.54
Pif1Q80SX8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pif1Q80SX8 Gm16148-201ENSMUST00000119653 893 ntBASIC24.65■■□□□ 1.54
Pif1Q80SX8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pif1Q80SX8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pif1Q80SX8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Pif1Q80SX8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pif1Q80SX8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pif1Q80SX8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pif1Q80SX8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.54■■□□□ 1.52
Pif1Q80SX8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pif1Q80SX8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pif1Q80SX8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pif1Q80SX8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pif1Q80SX8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pif1Q80SX8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pif1Q80SX8 Peli2-204ENSMUST00000226513 1320 ntBASIC24.5■■□□□ 1.51
Pif1Q80SX8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pif1Q80SX8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Pif1Q80SX8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Pif1Q80SX8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Pif1Q80SX8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pif1Q80SX8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pif1Q80SX8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.45■■□□□ 1.5
Pif1Q80SX8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pif1Q80SX8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pif1Q80SX8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pif1Q80SX8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
Pif1Q80SX8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms