Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Scn10aQ6QIY3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.29■■■□□ 2.92
Scn10aQ6QIY3 Gm27322-201ENSMUST00000184007 104 ntBASIC33.23■■■□□ 2.91
Scn10aQ6QIY3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Scn10aQ6QIY3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Scn10aQ6QIY3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Scn10aQ6QIY3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Scn10aQ6QIY3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Scn10aQ6QIY3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Scn10aQ6QIY3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Scn10aQ6QIY3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Scn10aQ6QIY3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Scn10aQ6QIY3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Scn10aQ6QIY3 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.92■■■□□ 2.86
Scn10aQ6QIY3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Scn10aQ6QIY3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.87■■■□□ 2.85
Scn10aQ6QIY3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Scn10aQ6QIY3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.81■■■□□ 2.84
Scn10aQ6QIY3 Zfp131-205ENSMUST00000223812 663 ntBASIC32.81■■■□□ 2.84
Scn10aQ6QIY3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.79■■■□□ 2.84
Scn10aQ6QIY3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Scn10aQ6QIY3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Scn10aQ6QIY3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Scn10aQ6QIY3 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.74■■■□□ 2.83
Scn10aQ6QIY3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Scn10aQ6QIY3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Scn10aQ6QIY3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.71■■■□□ 2.83
Scn10aQ6QIY3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Scn10aQ6QIY3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Scn10aQ6QIY3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Scn10aQ6QIY3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Scn10aQ6QIY3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
Scn10aQ6QIY3 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.57■■■□□ 2.8
Scn10aQ6QIY3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Scn10aQ6QIY3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Scn10aQ6QIY3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Scn10aQ6QIY3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Scn10aQ6QIY3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Scn10aQ6QIY3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Scn10aQ6QIY3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Scn10aQ6QIY3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Scn10aQ6QIY3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Scn10aQ6QIY3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Scn10aQ6QIY3 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.38■■■□□ 2.77
Scn10aQ6QIY3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
Scn10aQ6QIY3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Scn10aQ6QIY3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Scn10aQ6QIY3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.36■■■□□ 2.77
Scn10aQ6QIY3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.32■■■□□ 2.76
Scn10aQ6QIY3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Scn10aQ6QIY3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Scn10aQ6QIY3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
Scn10aQ6QIY3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Scn10aQ6QIY3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.23■■■□□ 2.75
Scn10aQ6QIY3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Scn10aQ6QIY3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Scn10aQ6QIY3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Scn10aQ6QIY3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Scn10aQ6QIY3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Scn10aQ6QIY3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scn10aQ6QIY3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scn10aQ6QIY3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.12■■■□□ 2.73
Scn10aQ6QIY3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Scn10aQ6QIY3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
Scn10aQ6QIY3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scn10aQ6QIY3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
Scn10aQ6QIY3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Scn10aQ6QIY3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Scn10aQ6QIY3 Gm16148-201ENSMUST00000119653 893 ntBASIC31.89■■■□□ 2.7
Scn10aQ6QIY3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
Scn10aQ6QIY3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Scn10aQ6QIY3 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.82■■■□□ 2.68
Scn10aQ6QIY3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
Scn10aQ6QIY3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Scn10aQ6QIY3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Scn10aQ6QIY3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Scn10aQ6QIY3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Scn10aQ6QIY3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Scn10aQ6QIY3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Scn10aQ6QIY3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Scn10aQ6QIY3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Scn10aQ6QIY3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Scn10aQ6QIY3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.75■■■□□ 2.67
Scn10aQ6QIY3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
Scn10aQ6QIY3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.74■■■□□ 2.67
Scn10aQ6QIY3 Peli2-204ENSMUST00000226513 1320 ntBASIC31.74■■■□□ 2.67
Scn10aQ6QIY3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.7■■■□□ 2.67
Scn10aQ6QIY3 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.7■■■□□ 2.67
Scn10aQ6QIY3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Scn10aQ6QIY3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Scn10aQ6QIY3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Scn10aQ6QIY3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Scn10aQ6QIY3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.59■■■□□ 2.65
Scn10aQ6QIY3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Scn10aQ6QIY3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Scn10aQ6QIY3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Scn10aQ6QIY3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Scn10aQ6QIY3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Scn10aQ6QIY3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
Scn10aQ6QIY3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.51■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms