Protein–RNA interactions for Protein: Q61789

Lama3, Laminin subunit alpha-3, mousemouse

Predictions only

Length 3,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama3Q61789 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
Lama3Q61789 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Lama3Q61789 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Lama3Q61789 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
Lama3Q61789 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Lama3Q61789 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.86■■■□□ 2.53
Lama3Q61789 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Lama3Q61789 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.74■■■□□ 2.51
Lama3Q61789 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.74■■■□□ 2.51
Lama3Q61789 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Lama3Q61789 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Lama3Q61789 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Lama3Q61789 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Lama3Q61789 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Lama3Q61789 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.63■■■□□ 2.49
Lama3Q61789 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.62■■■□□ 2.49
Lama3Q61789 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Lama3Q61789 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.52■■■□□ 2.48
Lama3Q61789 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Lama3Q61789 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.51■■■□□ 2.48
Lama3Q61789 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Lama3Q61789 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.44■■■□□ 2.46
Lama3Q61789 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Lama3Q61789 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.39■■■□□ 2.45
Lama3Q61789 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Lama3Q61789 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Lama3Q61789 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Lama3Q61789 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.33■■■□□ 2.45
Lama3Q61789 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.3■■■□□ 2.44
Lama3Q61789 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Lama3Q61789 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Lama3Q61789 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Lama3Q61789 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.22■■■□□ 2.43
Lama3Q61789 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Lama3Q61789 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Lama3Q61789 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lama3Q61789 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lama3Q61789 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Lama3Q61789 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Lama3Q61789 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.13■■■□□ 2.41
Lama3Q61789 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Lama3Q61789 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Lama3Q61789 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Lama3Q61789 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.04■■■□□ 2.4
Lama3Q61789 Gm16148-201ENSMUST00000119653 893 ntBASIC30.03■■■□□ 2.4
Lama3Q61789 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.03■■■□□ 2.4
Lama3Q61789 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Lama3Q61789 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Lama3Q61789 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Lama3Q61789 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Lama3Q61789 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Lama3Q61789 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Lama3Q61789 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.93■■■□□ 2.38
Lama3Q61789 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Lama3Q61789 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.91■■■□□ 2.38
Lama3Q61789 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Lama3Q61789 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Lama3Q61789 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Lama3Q61789 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
Lama3Q61789 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Lama3Q61789 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Lama3Q61789 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Lama3Q61789 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Lama3Q61789 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Lama3Q61789 Gm45855-201ENSMUST00000212546 880 ntBASIC29.83■■■□□ 2.37
Lama3Q61789 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Lama3Q61789 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Lama3Q61789 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Lama3Q61789 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
Lama3Q61789 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
Lama3Q61789 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Lama3Q61789 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Lama3Q61789 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.74■■■□□ 2.35
Lama3Q61789 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Lama3Q61789 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
Lama3Q61789 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Lama3Q61789 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Lama3Q61789 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.65■■■□□ 2.34
Lama3Q61789 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.64■■■□□ 2.34
Lama3Q61789 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Lama3Q61789 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lama3Q61789 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lama3Q61789 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.6■■■□□ 2.33
Lama3Q61789 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Lama3Q61789 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.58■■■□□ 2.33
Lama3Q61789 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Lama3Q61789 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Lama3Q61789 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Lama3Q61789 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.56■■■□□ 2.32
Lama3Q61789 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Lama3Q61789 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Lama3Q61789 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Lama3Q61789 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Lama3Q61789 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Lama3Q61789 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Lama3Q61789 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Lama3Q61789 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.45■■■□□ 2.31
Lama3Q61789 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Lama3Q61789 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.44■■■□□ 2.3
Lama3Q61789 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms