Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Traf4Q61382 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.03■■□□□ 1.44
Traf4Q61382 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Traf4Q61382 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Traf4Q61382 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Traf4Q61382 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Traf4Q61382 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Traf4Q61382 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.98■■□□□ 1.43
Traf4Q61382 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
Traf4Q61382 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.95■■□□□ 1.42
Traf4Q61382 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Traf4Q61382 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Traf4Q61382 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Traf4Q61382 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Traf4Q61382 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Traf4Q61382 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.88■■□□□ 1.41
Traf4Q61382 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Traf4Q61382 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Traf4Q61382 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.81■■□□□ 1.4
Traf4Q61382 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Traf4Q61382 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Traf4Q61382 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Traf4Q61382 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.77■■□□□ 1.4
Traf4Q61382 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Traf4Q61382 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.74■■□□□ 1.39
Traf4Q61382 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.72■■□□□ 1.39
Traf4Q61382 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.69■■□□□ 1.38
Traf4Q61382 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Traf4Q61382 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Traf4Q61382 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Traf4Q61382 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Traf4Q61382 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Traf4Q61382 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Traf4Q61382 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
Traf4Q61382 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Traf4Q61382 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Traf4Q61382 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Traf4Q61382 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
Traf4Q61382 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.57■■□□□ 1.36
Traf4Q61382 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Traf4Q61382 Gm27322-201ENSMUST00000184007 104 ntBASIC23.56■■□□□ 1.36
Traf4Q61382 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Traf4Q61382 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Traf4Q61382 Zxda-201ENSMUST00000117281 2621 ntBASIC23.5■■□□□ 1.35
Traf4Q61382 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Traf4Q61382 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Traf4Q61382 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Traf4Q61382 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Traf4Q61382 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Traf4Q61382 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.37■■□□□ 1.33
Traf4Q61382 Gm24804-201ENSMUST00000174982 85 ntBASIC23.33■■□□□ 1.33
Traf4Q61382 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Traf4Q61382 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Traf4Q61382 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Traf4Q61382 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.3■■□□□ 1.32
Traf4Q61382 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Traf4Q61382 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Traf4Q61382 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Traf4Q61382 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Traf4Q61382 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.26■■□□□ 1.31
Traf4Q61382 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.26■■□□□ 1.31
Traf4Q61382 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Traf4Q61382 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Traf4Q61382 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Traf4Q61382 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.19■■□□□ 1.3
Traf4Q61382 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Traf4Q61382 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Traf4Q61382 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Traf4Q61382 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Traf4Q61382 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Traf4Q61382 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Traf4Q61382 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Traf4Q61382 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Traf4Q61382 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Traf4Q61382 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.07■■□□□ 1.28
Traf4Q61382 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Traf4Q61382 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.06■■□□□ 1.28
Traf4Q61382 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Traf4Q61382 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Traf4Q61382 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.04■■□□□ 1.28
Traf4Q61382 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Traf4Q61382 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Traf4Q61382 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Traf4Q61382 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Traf4Q61382 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Traf4Q61382 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Traf4Q61382 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Traf4Q61382 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Traf4Q61382 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Traf4Q61382 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Traf4Q61382 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Traf4Q61382 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Traf4Q61382 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Traf4Q61382 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Traf4Q61382 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Traf4Q61382 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Traf4Q61382 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Traf4Q61382 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Traf4Q61382 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Traf4Q61382 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms