Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Foxd1Q61345 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Foxd1Q61345 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Foxd1Q61345 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.74■■■□□ 2.83
Foxd1Q61345 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Foxd1Q61345 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.73■■■□□ 2.83
Foxd1Q61345 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Foxd1Q61345 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Foxd1Q61345 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Foxd1Q61345 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Foxd1Q61345 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Foxd1Q61345 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Foxd1Q61345 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Foxd1Q61345 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
Foxd1Q61345 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Foxd1Q61345 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Foxd1Q61345 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Foxd1Q61345 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Foxd1Q61345 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.39■■■□□ 2.78
Foxd1Q61345 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Foxd1Q61345 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.38■■■□□ 2.77
Foxd1Q61345 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.37■■■□□ 2.77
Foxd1Q61345 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Foxd1Q61345 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Foxd1Q61345 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.23■■■□□ 2.75
Foxd1Q61345 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.21■■■□□ 2.75
Foxd1Q61345 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.21■■■□□ 2.75
Foxd1Q61345 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.2■■■□□ 2.75
Foxd1Q61345 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Foxd1Q61345 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Foxd1Q61345 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.11■■■□□ 2.73
Foxd1Q61345 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Foxd1Q61345 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.09■■■□□ 2.73
Foxd1Q61345 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.08■■■□□ 2.73
Foxd1Q61345 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Foxd1Q61345 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
Foxd1Q61345 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32■■■□□ 2.71
Foxd1Q61345 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.99■■■□□ 2.71
Foxd1Q61345 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.98■■■□□ 2.71
Foxd1Q61345 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Foxd1Q61345 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.96■■■□□ 2.71
Foxd1Q61345 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Foxd1Q61345 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Foxd1Q61345 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.93■■■□□ 2.7
Foxd1Q61345 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Foxd1Q61345 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Foxd1Q61345 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Foxd1Q61345 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Foxd1Q61345 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Foxd1Q61345 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Foxd1Q61345 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Foxd1Q61345 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Foxd1Q61345 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Foxd1Q61345 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Foxd1Q61345 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Foxd1Q61345 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Foxd1Q61345 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Foxd1Q61345 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Foxd1Q61345 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.67■■■□□ 2.66
Foxd1Q61345 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Foxd1Q61345 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Foxd1Q61345 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Foxd1Q61345 Gm16148-201ENSMUST00000119653 893 ntBASIC31.63■■■□□ 2.65
Foxd1Q61345 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.63■■■□□ 2.65
Foxd1Q61345 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Foxd1Q61345 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.59■■■□□ 2.65
Foxd1Q61345 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Foxd1Q61345 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Foxd1Q61345 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.52■■■□□ 2.64
Foxd1Q61345 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Foxd1Q61345 Gm45855-201ENSMUST00000212546 880 ntBASIC31.5■■■□□ 2.63
Foxd1Q61345 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Foxd1Q61345 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Foxd1Q61345 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Foxd1Q61345 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Foxd1Q61345 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Foxd1Q61345 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Foxd1Q61345 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Foxd1Q61345 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Foxd1Q61345 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Foxd1Q61345 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Foxd1Q61345 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.33■■■□□ 2.61
Foxd1Q61345 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
Foxd1Q61345 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Foxd1Q61345 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Foxd1Q61345 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Foxd1Q61345 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.25■■■□□ 2.59
Foxd1Q61345 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Foxd1Q61345 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Foxd1Q61345 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Foxd1Q61345 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.21■■■□□ 2.59
Foxd1Q61345 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.21■■■□□ 2.59
Foxd1Q61345 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Foxd1Q61345 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Foxd1Q61345 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Foxd1Q61345 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Foxd1Q61345 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Foxd1Q61345 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Foxd1Q61345 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.16■■■□□ 2.58
Foxd1Q61345 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms