Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.92■■■□□ 2.86
Scnn1aQ61180 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Scnn1aQ61180 Gm8109-201ENSMUST00000194076 746 ntBASIC32.88■■■□□ 2.85
Scnn1aQ61180 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Scnn1aQ61180 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
Scnn1aQ61180 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Scnn1aQ61180 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Scnn1aQ61180 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Scnn1aQ61180 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Scnn1aQ61180 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.64■■■□□ 2.82
Scnn1aQ61180 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Scnn1aQ61180 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Scnn1aQ61180 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Scnn1aQ61180 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.54■■■□□ 2.8
Scnn1aQ61180 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Scnn1aQ61180 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Scnn1aQ61180 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.52■■■□□ 2.8
Scnn1aQ61180 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Scnn1aQ61180 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.51■■■□□ 2.79
Scnn1aQ61180 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Scnn1aQ61180 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Scnn1aQ61180 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Scnn1aQ61180 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Scnn1aQ61180 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Scnn1aQ61180 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Scnn1aQ61180 Gm27322-201ENSMUST00000184007 104 ntBASIC32.35■■■□□ 2.77
Scnn1aQ61180 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
Scnn1aQ61180 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Scnn1aQ61180 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.19■■■□□ 2.74
Scnn1aQ61180 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Scnn1aQ61180 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Scnn1aQ61180 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Scnn1aQ61180 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.08■■■□□ 2.73
Scnn1aQ61180 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Scnn1aQ61180 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Scnn1aQ61180 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Scnn1aQ61180 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Scnn1aQ61180 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Scnn1aQ61180 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.95■■■□□ 2.71
Scnn1aQ61180 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Scnn1aQ61180 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Scnn1aQ61180 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
Scnn1aQ61180 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Scnn1aQ61180 Gm24804-201ENSMUST00000174982 85 ntBASIC31.89■■■□□ 2.7
Scnn1aQ61180 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.88■■■□□ 2.69
Scnn1aQ61180 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Scnn1aQ61180 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.86■■■□□ 2.69
Scnn1aQ61180 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.85■■■□□ 2.69
Scnn1aQ61180 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Scnn1aQ61180 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.85■■■□□ 2.69
Scnn1aQ61180 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.85■■■□□ 2.69
Scnn1aQ61180 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Scnn1aQ61180 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Scnn1aQ61180 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Scnn1aQ61180 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Scnn1aQ61180 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Scnn1aQ61180 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Scnn1aQ61180 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Scnn1aQ61180 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.65■■■□□ 2.66
Scnn1aQ61180 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.64■■■□□ 2.66
Scnn1aQ61180 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Scnn1aQ61180 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Scnn1aQ61180 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Scnn1aQ61180 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Scnn1aQ61180 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scnn1aQ61180 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Scnn1aQ61180 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Scnn1aQ61180 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Scnn1aQ61180 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Scnn1aQ61180 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Scnn1aQ61180 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Scnn1aQ61180 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.37■■■□□ 2.61
Scnn1aQ61180 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Scnn1aQ61180 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Scnn1aQ61180 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Scnn1aQ61180 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Scnn1aQ61180 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Scnn1aQ61180 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Scnn1aQ61180 Mipep-204ENSMUST00000225043 1548 ntBASIC31.27■■■□□ 2.6
Scnn1aQ61180 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Scnn1aQ61180 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scnn1aQ61180 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Scnn1aQ61180 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Scnn1aQ61180 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Scnn1aQ61180 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Scnn1aQ61180 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Scnn1aQ61180 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Scnn1aQ61180 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Scnn1aQ61180 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Scnn1aQ61180 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scnn1aQ61180 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.08■■■□□ 2.57
Scnn1aQ61180 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Scnn1aQ61180 Peli2-204ENSMUST00000226513 1320 ntBASIC31.07■■■□□ 2.56
Scnn1aQ61180 Zfp131-205ENSMUST00000223812 663 ntBASIC31.07■■■□□ 2.56
Scnn1aQ61180 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Scnn1aQ61180 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Scnn1aQ61180 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Scnn1aQ61180 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Scnn1aQ61180 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31■■■□□ 2.55
Scnn1aQ61180 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms