Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Zfp131-205ENSMUST00000223812 663 ntBASIC42.38■■■■■ 4.38
Ptch1Q61115 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC42.38■■■■■ 4.38
Ptch1Q61115 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC42.35■■■■■ 4.37
Ptch1Q61115 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Ptch1Q61115 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Ptch1Q61115 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC42.28■■■■■ 4.36
Ptch1Q61115 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC42.27■■■■■ 4.36
Ptch1Q61115 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC42.22■■■■■ 4.35
Ptch1Q61115 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC42.21■■■■■ 4.35
Ptch1Q61115 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC42.13■■■■■ 4.33
Ptch1Q61115 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC42.08■■■■■ 4.33
Ptch1Q61115 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC42.06■■■■■ 4.32
Ptch1Q61115 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC42.04■■■■■ 4.32
Ptch1Q61115 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC42.02■■■■■ 4.32
Ptch1Q61115 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC42.01■■■■■ 4.32
Ptch1Q61115 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC41.97■■■■■ 4.31
Ptch1Q61115 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.97■■■■■ 4.31
Ptch1Q61115 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC41.95■■■■■ 4.31
Ptch1Q61115 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC41.93■■■■■ 4.3
Ptch1Q61115 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC41.93■■■■■ 4.3
Ptch1Q61115 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC41.87■■■■■ 4.29
Ptch1Q61115 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC41.84■■■■■ 4.29
Ptch1Q61115 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
Ptch1Q61115 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC41.82■■■■■ 4.28
Ptch1Q61115 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
Ptch1Q61115 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC41.79■■■■■ 4.28
Ptch1Q61115 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC41.75■■■■■ 4.27
Ptch1Q61115 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Ptch1Q61115 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC41.68■■■■■ 4.26
Ptch1Q61115 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC41.61■■■■■ 4.25
Ptch1Q61115 AC166822.3-201ENSMUST00000227394 661 ntBASIC41.56■■■■■ 4.24
Ptch1Q61115 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC41.54■■■■■ 4.24
Ptch1Q61115 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
Ptch1Q61115 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
Ptch1Q61115 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC41.51■■■■■ 4.24
Ptch1Q61115 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
Ptch1Q61115 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
Ptch1Q61115 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC41.49■■■■■ 4.23
Ptch1Q61115 Gm42596-201ENSMUST00000196305 1958 ntBASIC41.47■■■■■ 4.23
Ptch1Q61115 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC41.43■■■■■ 4.22
Ptch1Q61115 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
Ptch1Q61115 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
Ptch1Q61115 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC41.35■■■■■ 4.21
Ptch1Q61115 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC41.31■■■■■ 4.2
Ptch1Q61115 CT025624.2-201ENSMUST00000223609 1909 ntBASIC41.25■■■■■ 4.19
Ptch1Q61115 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC41.23■■■■■ 4.19
Ptch1Q61115 Gm10524-201ENSMUST00000181931 1893 ntBASIC41.22■■■■■ 4.19
Ptch1Q61115 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC41.22■■■■■ 4.19
Ptch1Q61115 AL845457.1-201ENSMUST00000197244 68 ntBASIC41.19■■■■■ 4.18
Ptch1Q61115 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC41.12■■■■■ 4.17
Ptch1Q61115 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Ptch1Q61115 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Ptch1Q61115 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC41.09■■■■■ 4.17
Ptch1Q61115 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Ptch1Q61115 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC41.05■■■■■ 4.16
Ptch1Q61115 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
Ptch1Q61115 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC41.02■■■■■ 4.16
Ptch1Q61115 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC40.97■■■■■ 4.15
Ptch1Q61115 Gm16148-201ENSMUST00000119653 893 ntBASIC40.94■■■■■ 4.14
Ptch1Q61115 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Ptch1Q61115 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
Ptch1Q61115 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC40.92■■■■■ 4.14
Ptch1Q61115 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC40.92■■■■■ 4.14
Ptch1Q61115 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC40.92■■■■■ 4.14
Ptch1Q61115 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
Ptch1Q61115 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC40.87■■■■■ 4.13
Ptch1Q61115 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40.84■■■■■ 4.13
Ptch1Q61115 Tdp2-203ENSMUST00000223804 1136 ntBASIC40.83■■■■■ 4.13
Ptch1Q61115 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.13
Ptch1Q61115 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC40.81■■■■■ 4.12
Ptch1Q61115 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC40.8■■■■■ 4.12
Ptch1Q61115 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Ptch1Q61115 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
Ptch1Q61115 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Ptch1Q61115 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Ptch1Q61115 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC40.72■■■■■ 4.11
Ptch1Q61115 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC40.71■■■■■ 4.11
Ptch1Q61115 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC40.67■■■■■ 4.1
Ptch1Q61115 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC40.65■■■■■ 4.1
Ptch1Q61115 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC40.59■■■■■ 4.09
Ptch1Q61115 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC40.59■■■■■ 4.09
Ptch1Q61115 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC40.57■■■■■ 4.08
Ptch1Q61115 Peli2-204ENSMUST00000226513 1320 ntBASIC40.54■■■■■ 4.08
Ptch1Q61115 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC40.53■■■■■ 4.08
Ptch1Q61115 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
Ptch1Q61115 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC40.52■■■■■ 4.08
Ptch1Q61115 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
Ptch1Q61115 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC40.5■■■■■ 4.07
Ptch1Q61115 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Ptch1Q61115 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
Ptch1Q61115 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC40.41■■■■■ 4.06
Ptch1Q61115 Gm45855-201ENSMUST00000212546 880 ntBASIC40.39■■■■■ 4.06
Ptch1Q61115 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
Ptch1Q61115 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC40.36■■■■■ 4.05
Ptch1Q61115 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
Ptch1Q61115 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Ptch1Q61115 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC40.28■■■■■ 4.04
Ptch1Q61115 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC40.25■■■■■ 4.03
Ptch1Q61115 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC40.25■■■■■ 4.03
Ptch1Q61115 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms