Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cks1brtQ3UNC9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.64■□□□□ 0.73
Cks1brtQ3UNC9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cks1brtQ3UNC9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cks1brtQ3UNC9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cks1brtQ3UNC9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.6■□□□□ 0.73
Cks1brtQ3UNC9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1brtQ3UNC9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1brtQ3UNC9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1brtQ3UNC9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cks1brtQ3UNC9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cks1brtQ3UNC9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cks1brtQ3UNC9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cks1brtQ3UNC9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cks1brtQ3UNC9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cks1brtQ3UNC9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cks1brtQ3UNC9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cks1brtQ3UNC9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cks1brtQ3UNC9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1brtQ3UNC9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1brtQ3UNC9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cks1brtQ3UNC9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cks1brtQ3UNC9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cks1brtQ3UNC9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cks1brtQ3UNC9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cks1brtQ3UNC9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cks1brtQ3UNC9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cks1brtQ3UNC9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cks1brtQ3UNC9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cks1brtQ3UNC9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cks1brtQ3UNC9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cks1brtQ3UNC9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Cks1brtQ3UNC9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cks1brtQ3UNC9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cks1brtQ3UNC9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cks1brtQ3UNC9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cks1brtQ3UNC9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cks1brtQ3UNC9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cks1brtQ3UNC9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cks1brtQ3UNC9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.22■□□□□ 0.67
Cks1brtQ3UNC9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cks1brtQ3UNC9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.21■□□□□ 0.67
Cks1brtQ3UNC9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cks1brtQ3UNC9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.2■□□□□ 0.66
Cks1brtQ3UNC9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cks1brtQ3UNC9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cks1brtQ3UNC9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cks1brtQ3UNC9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cks1brtQ3UNC9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cks1brtQ3UNC9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cks1brtQ3UNC9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cks1brtQ3UNC9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cks1brtQ3UNC9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cks1brtQ3UNC9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Cks1brtQ3UNC9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cks1brtQ3UNC9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cks1brtQ3UNC9 Zxda-201ENSMUST00000117281 2621 ntBASIC19.12■□□□□ 0.65
Cks1brtQ3UNC9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks1brtQ3UNC9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks1brtQ3UNC9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks1brtQ3UNC9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks1brtQ3UNC9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Cks1brtQ3UNC9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cks1brtQ3UNC9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.04■□□□□ 0.64
Cks1brtQ3UNC9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cks1brtQ3UNC9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cks1brtQ3UNC9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cks1brtQ3UNC9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cks1brtQ3UNC9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cks1brtQ3UNC9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cks1brtQ3UNC9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Cks1brtQ3UNC9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cks1brtQ3UNC9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1brtQ3UNC9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1brtQ3UNC9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1brtQ3UNC9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cks1brtQ3UNC9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks1brtQ3UNC9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cks1brtQ3UNC9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cks1brtQ3UNC9 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.88■□□□□ 0.61
Cks1brtQ3UNC9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks1brtQ3UNC9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cks1brtQ3UNC9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1brtQ3UNC9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1brtQ3UNC9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks1brtQ3UNC9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cks1brtQ3UNC9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cks1brtQ3UNC9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cks1brtQ3UNC9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cks1brtQ3UNC9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cks1brtQ3UNC9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Cks1brtQ3UNC9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cks1brtQ3UNC9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cks1brtQ3UNC9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms