Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lrfn1Q2WF71 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
Lrfn1Q2WF71 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Lrfn1Q2WF71 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lrfn1Q2WF71 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.67■■□□□ 1.54
Lrfn1Q2WF71 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Lrfn1Q2WF71 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lrfn1Q2WF71 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Lrfn1Q2WF71 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lrfn1Q2WF71 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Lrfn1Q2WF71 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Lrfn1Q2WF71 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrfn1Q2WF71 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lrfn1Q2WF71 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lrfn1Q2WF71 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lrfn1Q2WF71 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
Lrfn1Q2WF71 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.49■■□□□ 1.51
Lrfn1Q2WF71 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.49■■□□□ 1.51
Lrfn1Q2WF71 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Lrfn1Q2WF71 Gm27325-201ENSMUST00000175467 74 ntBASIC24.47■■□□□ 1.51
Lrfn1Q2WF71 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lrfn1Q2WF71 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lrfn1Q2WF71 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrfn1Q2WF71 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrfn1Q2WF71 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Lrfn1Q2WF71 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lrfn1Q2WF71 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.38■■□□□ 1.49
Lrfn1Q2WF71 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Lrfn1Q2WF71 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lrfn1Q2WF71 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lrfn1Q2WF71 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lrfn1Q2WF71 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lrfn1Q2WF71 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lrfn1Q2WF71 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lrfn1Q2WF71 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lrfn1Q2WF71 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.24■■□□□ 1.47
Lrfn1Q2WF71 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.23■■□□□ 1.47
Lrfn1Q2WF71 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Lrfn1Q2WF71 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lrfn1Q2WF71 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Lrfn1Q2WF71 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Lrfn1Q2WF71 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lrfn1Q2WF71 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.18■■□□□ 1.46
Lrfn1Q2WF71 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.15■■□□□ 1.46
Lrfn1Q2WF71 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Lrfn1Q2WF71 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
Lrfn1Q2WF71 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lrfn1Q2WF71 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lrfn1Q2WF71 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Lrfn1Q2WF71 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Lrfn1Q2WF71 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lrfn1Q2WF71 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lrfn1Q2WF71 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lrfn1Q2WF71 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lrfn1Q2WF71 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lrfn1Q2WF71 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Lrfn1Q2WF71 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24■■□□□ 1.43
Lrfn1Q2WF71 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Lrfn1Q2WF71 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lrfn1Q2WF71 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lrfn1Q2WF71 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lrfn1Q2WF71 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lrfn1Q2WF71 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lrfn1Q2WF71 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lrfn1Q2WF71 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Lrfn1Q2WF71 Rab21-202ENSMUST00000218831 843 ntBASIC23.91■■□□□ 1.42
Lrfn1Q2WF71 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lrfn1Q2WF71 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Lrfn1Q2WF71 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lrfn1Q2WF71 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lrfn1Q2WF71 Gm25262-201ENSMUST00000174934 133 ntBASIC23.86■■□□□ 1.41
Lrfn1Q2WF71 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Lrfn1Q2WF71 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Lrfn1Q2WF71 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.84■■□□□ 1.41
Lrfn1Q2WF71 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lrfn1Q2WF71 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.81■■□□□ 1.4
Lrfn1Q2WF71 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lrfn1Q2WF71 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lrfn1Q2WF71 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lrfn1Q2WF71 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
Lrfn1Q2WF71 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
Lrfn1Q2WF71 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lrfn1Q2WF71 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Lrfn1Q2WF71 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Lrfn1Q2WF71 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lrfn1Q2WF71 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lrfn1Q2WF71 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lrfn1Q2WF71 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.66■■□□□ 1.38
Lrfn1Q2WF71 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lrfn1Q2WF71 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.66■■□□□ 1.38
Lrfn1Q2WF71 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lrfn1Q2WF71 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Lrfn1Q2WF71 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.62■■□□□ 1.37
Lrfn1Q2WF71 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Lrfn1Q2WF71 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lrfn1Q2WF71 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrfn1Q2WF71 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrfn1Q2WF71 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Lrfn1Q2WF71 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Lrfn1Q2WF71 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 158.7 ms